Sphingomonas sp. FARSPH: DM480_13610
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Entry
DM480_13610 CDS
T05685
Name
(GenBank) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphf03019
]
DM480_13610
03009 Ribosome biogenesis [BR:
sphf03009
]
DM480_13610
Messenger RNA biogenesis [BR:
sphf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM480_13610
Ribosome biogenesis [BR:
sphf03009
]
Eukaryotic type
Pre-60S particles
RNases
DM480_13610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXJ96370
UniProt:
A0A345WRR8
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All DBs
Position
2870779..2871132
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AA seq
117 aa
AA seq
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MSFYELDPKRPGEPLACELERFADYRVLRRLPQPDELWCRSMPVPTNVMKLAVIDVETTG
LDPARHKIIELAIGTISIDMAQGDLVDVSPPRSWLEDPAEDLSIEIERLTRITSGAC
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctacgaactggacccgaagcgccccggcgagccgcttgcgtgcgaactcgag
cgctttgccgattaccgcgtgctgcgccgcctgccgcagcccgatgagctctggtgccgc
tcgatgccggtgccgacgaacgtgatgaagctcgccgtgatcgacgtcgaaaccaccggg
ctggaccctgcgcggcataagatcatcgaactggcgatcggcacgatcagcatcgatatg
gcgcagggcgacctggtcgatgtgtcgccgccgcgctcctggctggaagacccggccgag
gacctgtcgatcgagatcgaacggctgacccgcataacctcaggggcatgctga
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