Sphingorhabdus sp. M41: AZE99_05830
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Entry
AZE99_05830 CDS
T04317
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZE99_05830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_05830
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AZE99_05830
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AZE99_05830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AMO71440
UniProt:
A0A127ME03
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Position
1208543..1209277
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AA seq
244 aa
AA seq
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MPNLRTSAIICSVRSHGEHGAVVRSLTPENGLVTGYVRGAHSRNMRPILIPSNIVQADYR
SRTEDQLASMTAELQQSRGPFLGEPLASAALDWVTALTAAVLPEEHSYPQLHSALSALLD
AICGAPSAKGWAVALVRYELLLLSELGFGLALDRCAVTGFEDDLVYISPKSATAVSAFAG
QEYKERLLPLPAFLKEPVTPEWDDIFDGLRVTGFFLKRHFFEDRRRDVMAARTVLVDRLK
RVVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaacctccgcacttccgcgatcatctgttccgttcgttcccatggtgagcatggc
gccgtcgtgcgttcgctaacccccgaaaatggtttggtaaccggctacgtccgcggcgcg
cattcgcgcaatatgcggccgattttgatcccctccaatatcgtgcaagctgactatcgt
tcgcggaccgaggatcagctggcgtcgatgacggcggaattgcagcagagccgggggcct
tttctgggtgaaccgctggccagcgcggcgctggactgggtgactgccctgactgctgcg
gtgctgccggaggagcatagctatccgcagcttcattcggcgctttccgctttgctcgac
gccatttgtggcgctccgtcggccaagggctgggcggtggctcttgtacgctatgagctg
ctgctgctctcggaactgggcttcgggctggcgctggacagatgcgcggtgacggggttc
gaggatgatctggtttacattagtccgaaaagcgcgacggcggtcagcgctttcgccggg
caggaatataaggaacggctgttgccgcttccggcctttctgaaggagccggtcacaccc
gaatgggacgatattttcgacgggctgcgcgttactggttttttcctgaaacgtcatttc
ttcgaggatcggcgcagggatgtaatggcggcgcggacggtattggtcgatcggctgaaa
agggtggttgcctaa
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