KEGG   Spiroplasma phoeniceum: SDAV_00862
Entry
SDAV_00862        CDS       T06376                                 
Name
(GenBank) DNA topoisomerase IA
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sphh  Spiroplasma phoeniceum
Brite
KEGG Orthology (KO) [BR:sphh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphh03032]
    SDAV_00862
   03400 DNA repair and recombination proteins [BR:sphh03400]
    SDAV_00862
Enzymes [BR:sphh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SDAV_00862
DNA replication proteins [BR:sphh03032]
 Prokaryotic type
  DNA Topoisomerases
   SDAV_00862
DNA repair and recombination proteins [BR:sphh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SDAV_00862
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF3797 DUF5795 Zn_Tnp_IS1 RNA_POL_M_15KD Zn_Tnp_IS1595 DZR DUF6730
Other DBs
NCBI-ProteinID: AXF95845
UniProt: A0A345DNQ7
LinkDB
Position
complement(652935..654929)
AA seq 664 aa
MAQTLVIMESPTKTKSVEKYLGENYLVLSSEGHIRNLSTKGEYGLGVDIKTFEPSYKMER
GKKEIVKKLKQEAKAADLVILATDPDREGEAIAYHLNEVLNCGEKSRRVRFNEITKEAVL
EAFQHQTDLDMNLVHSQETRRILDRFIGFRLSKLLQKKIKSKSAGRVQSVALKLVVEREK
EWQNFVPDEYWTVEGLYKKAVVKLTKFKDEKIELKVEADVLKVKKALKKDFVVVQIKESE
KQQKSPNPHTTSTMLQEASSKMGFASNKTSLIAQQLYEGIKVKDNITGFITYPRTDSIRL
SDKFVQDAFDYITIKYGTEYLGWVKTPPKNKKNVQDAHEAIRPTDLTMTPEAAKEYLSRD
QIRLYKIIYNRSLASLMANAKLLSKTIILDNNNYEFRMTGSTIQFDGFLKCYVLEGDEEI
LKLPMLKPNQIFNLNELYGIQHFTKPPSRYSEAKLIKTLEEIGVGRPSTYAPIMRTLKNR
GYIIVENKAIKATEKGILTSDKLQEYFSDIINEKYTSTIEESLDVIAHGDAEPKPLLKEF
WERFEPRIEAAMELMEEIPVEKAGIECPECGNDLVYRYGKYGKFIACSGFPKCHYIHQIG
PKFGPCPECGVGEIILKFNKRRQRFKACTNYPNCNYTDSYKEEKTEQEENNSENNGLYRI
NLLK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcacagacgctggtaataatggagtccccaactaaaacaaaatcggttgaaaaatat
cttggcgaaaattatttagttttatcatcagaaggacatattcgtaatttatcaacaaaa
ggtgagtatgggttaggagtagatattaaaacttttgaaccaagttataaaatggaacgt
ggaaaaaaagaaattgttaaaaaattaaaacaagaagccaaagcagcagatttggttatt
ctagcaaccgaccctgaccgagaaggagaagcaattgcttatcatttaaatgaagtatta
aattgtggtgagaaatctcgccgtgttcgctttaatgaaattacaaaagaagcagtgtta
gaggcatttcaacatcaaacagatttagatatgaatttagttcattcacaagaaactcga
cgaattttagaccgttttattggttttcgcttaagcaaattgttacagaaaaagattaag
tcaaaatcagctggacgagtacaatcggttgctttaaagttagttgttgaacgagaaaaa
gaatggcaaaactttgtgccggatgaatattggactgttgaaggattatataaaaaggca
gttgtgaaattaacaaaatttaaggatgaaaaaattgaattaaaagtagaagcagatgtt
ctaaaagttaaaaaagctttaaaaaaagattttgttgttgttcaaattaaagaaagtgaa
aaacaacaaaaatcaccgaatccacatactacttcaacaatgttacaagaagcaagtagt
aaaatgggttttgcttcaaataaaacatcattaattgctcagcaattatacgaaggaatt
aaagttaaagataatattactggatttataacatatccgcggacagattcaattcgatta
agtgataagtttgttcaggatgcttttgactatattacaattaaatatggaacagaatat
ttaggttgagttaaaacaccaccaaaaaataaaaaaaatgtgcaagatgctcatgaagca
attcgtccaactgatttaacaatgacaccagaagcggcaaaagaatatttaagtcgtgat
caaatacgtttatataaaattatttataatcgttcgttagctagtttaatggcgaatgca
aagttattaagtaaaacaattattttagataataataattatgaatttcggatgacagga
agtacgattcaatttgatgggtttttaaaatgttatgttttagaaggtgatgaagaaatt
ttaaagttgccaatgttaaaaccaaatcaaatttttaatttaaatgaattatatggaatt
caacattttactaaaccaccgagtcgttactctgaagcgaaattaattaagacattagag
gaaattggggttggacgtccatcaacttatgcaccaattatgcgaacattaaaaaatcgt
ggttatattattgtagaaaacaaagcaattaaagcaactgaaaaagggattttaacaagt
gataaattacaagaatattttagtgatattattaacgaaaaatacacttcaacaattgaa
gaaagtttggatgtgattgcacacggtgacgcagaaccaaagccattattaaaagaattt
tgagaacgatttgagccacgcattgaagcagcaatggaattaatggaagaaatcccagtt
gagaaggcggggattgaatgtccagaatgtggaaatgatttagtatatcggtatggaaaa
tatggtaaatttattgcatgttcagggtttccaaaatgtcattatattcatcagattggt
ccaaaatttggtccttgtccagaatgcggcgttggtgaaattattttgaaatttaataag
cgacgtcaacgttttaaggcgtgtactaattatccaaattgtaattacactgattcatat
aaagaagaaaagaccgaacaagaagaaaataatagcgaaaataacggattgtatcgaatt
aatttattaaaataa

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