Spiroplasma phoeniceum: SDAV_00862
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Entry
SDAV_00862 CDS
T06376
Name
(GenBank) DNA topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphh
Spiroplasma phoeniceum
Brite
KEGG Orthology (KO) [BR:
sphh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphh03032
]
SDAV_00862
03400 DNA repair and recombination proteins [BR:
sphh03400
]
SDAV_00862
Enzymes [BR:
sphh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SDAV_00862
DNA replication proteins [BR:
sphh03032
]
Prokaryotic type
DNA Topoisomerases
SDAV_00862
DNA repair and recombination proteins [BR:
sphh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SDAV_00862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
DUF3797
DUF5795
Zn_Tnp_IS1
RNA_POL_M_15KD
Zn_Tnp_IS1595
DZR
DUF6730
Motif
Other DBs
NCBI-ProteinID:
AXF95845
UniProt:
A0A345DNQ7
LinkDB
All DBs
Position
complement(652935..654929)
Genome browser
AA seq
664 aa
AA seq
DB search
MAQTLVIMESPTKTKSVEKYLGENYLVLSSEGHIRNLSTKGEYGLGVDIKTFEPSYKMER
GKKEIVKKLKQEAKAADLVILATDPDREGEAIAYHLNEVLNCGEKSRRVRFNEITKEAVL
EAFQHQTDLDMNLVHSQETRRILDRFIGFRLSKLLQKKIKSKSAGRVQSVALKLVVEREK
EWQNFVPDEYWTVEGLYKKAVVKLTKFKDEKIELKVEADVLKVKKALKKDFVVVQIKESE
KQQKSPNPHTTSTMLQEASSKMGFASNKTSLIAQQLYEGIKVKDNITGFITYPRTDSIRL
SDKFVQDAFDYITIKYGTEYLGWVKTPPKNKKNVQDAHEAIRPTDLTMTPEAAKEYLSRD
QIRLYKIIYNRSLASLMANAKLLSKTIILDNNNYEFRMTGSTIQFDGFLKCYVLEGDEEI
LKLPMLKPNQIFNLNELYGIQHFTKPPSRYSEAKLIKTLEEIGVGRPSTYAPIMRTLKNR
GYIIVENKAIKATEKGILTSDKLQEYFSDIINEKYTSTIEESLDVIAHGDAEPKPLLKEF
WERFEPRIEAAMELMEEIPVEKAGIECPECGNDLVYRYGKYGKFIACSGFPKCHYIHQIG
PKFGPCPECGVGEIILKFNKRRQRFKACTNYPNCNYTDSYKEEKTEQEENNSENNGLYRI
NLLK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacgctggtaataatggagtccccaactaaaacaaaatcggttgaaaaatat
cttggcgaaaattatttagttttatcatcagaaggacatattcgtaatttatcaacaaaa
ggtgagtatgggttaggagtagatattaaaacttttgaaccaagttataaaatggaacgt
ggaaaaaaagaaattgttaaaaaattaaaacaagaagccaaagcagcagatttggttatt
ctagcaaccgaccctgaccgagaaggagaagcaattgcttatcatttaaatgaagtatta
aattgtggtgagaaatctcgccgtgttcgctttaatgaaattacaaaagaagcagtgtta
gaggcatttcaacatcaaacagatttagatatgaatttagttcattcacaagaaactcga
cgaattttagaccgttttattggttttcgcttaagcaaattgttacagaaaaagattaag
tcaaaatcagctggacgagtacaatcggttgctttaaagttagttgttgaacgagaaaaa
gaatggcaaaactttgtgccggatgaatattggactgttgaaggattatataaaaaggca
gttgtgaaattaacaaaatttaaggatgaaaaaattgaattaaaagtagaagcagatgtt
ctaaaagttaaaaaagctttaaaaaaagattttgttgttgttcaaattaaagaaagtgaa
aaacaacaaaaatcaccgaatccacatactacttcaacaatgttacaagaagcaagtagt
aaaatgggttttgcttcaaataaaacatcattaattgctcagcaattatacgaaggaatt
aaagttaaagataatattactggatttataacatatccgcggacagattcaattcgatta
agtgataagtttgttcaggatgcttttgactatattacaattaaatatggaacagaatat
ttaggttgagttaaaacaccaccaaaaaataaaaaaaatgtgcaagatgctcatgaagca
attcgtccaactgatttaacaatgacaccagaagcggcaaaagaatatttaagtcgtgat
caaatacgtttatataaaattatttataatcgttcgttagctagtttaatggcgaatgca
aagttattaagtaaaacaattattttagataataataattatgaatttcggatgacagga
agtacgattcaatttgatgggtttttaaaatgttatgttttagaaggtgatgaagaaatt
ttaaagttgccaatgttaaaaccaaatcaaatttttaatttaaatgaattatatggaatt
caacattttactaaaccaccgagtcgttactctgaagcgaaattaattaagacattagag
gaaattggggttggacgtccatcaacttatgcaccaattatgcgaacattaaaaaatcgt
ggttatattattgtagaaaacaaagcaattaaagcaactgaaaaagggattttaacaagt
gataaattacaagaatattttagtgatattattaacgaaaaatacacttcaacaattgaa
gaaagtttggatgtgattgcacacggtgacgcagaaccaaagccattattaaaagaattt
tgagaacgatttgagccacgcattgaagcagcaatggaattaatggaagaaatcccagtt
gagaaggcggggattgaatgtccagaatgtggaaatgatttagtatatcggtatggaaaa
tatggtaaatttattgcatgttcagggtttccaaaatgtcattatattcatcagattggt
ccaaaatttggtccttgtccagaatgcggcgttggtgaaattattttgaaatttaataag
cgacgtcaacgttttaaggcgtgtactaattatccaaattgtaattacactgattcatat
aaagaagaaaagaccgaacaagaagaaaataatagcgaaaataacggattgtatcgaatt
aatttattaaaataa
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