Sphingomonas hengshuiensis: TS85_23250
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Entry
TS85_23250 CDS
T03848
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sphi
Sphingomonas hengshuiensis
Pathway
sphi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TS85_23250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphi03400
]
TS85_23250
DNA repair and recombination proteins [BR:
sphi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TS85_23250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Flavi_DEAD
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AJP74765
UniProt:
A0A7U5BGC7
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Position
complement(5090115..5092694)
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AA seq
859 aa
AA seq
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MMSQYLALKAEAEDCLLFYRMGDFFELFFDDAKIASACLDIALTARGEHEGTRIPMCGVP
VHAMEGYLARLIKAGHRVAIAEQTETPEAARKRMGSKALVNRAIVRVVTAGTLTEETLLD
SRSANWCVVIGEAGGQVAIACADISTGRFDVVESDPDRVGAEIARLSPAETIASDATGFA
DLANVLRPRADFDSAGGEERLKRLFGVATLDGFGSFSRAALAAAGGLVAYLEHTAKGSLP
FLRPPSLSQTDAAMAIDAATRESLELTTSTAGARKGSLLDSVDRTVTGAGARLLGADIAA
PLMDRRAIEARLDLVRRFHDDSGLRESVRAALRALPDIGRALGRLAAGRGSPRDLGQLRD
GLDGAWRLGERLGAIADKPALLDDLAPMLRGHGALIDLLTRALVPEPPVDAAQGGYIAEG
YDAALDDLRDSGAGGRRAIAALEAEYRARTGIGALKIRHNGVLGYHIEVPARAADALMAQ
DSGFTHRQTLAGVVRFNAPELHDVALRVTQAGAHALAAEAAHLEDLTVTALDRREPIAAT
ADALARIDVAAGLAERAAEGGWARPTLVDHGCFEIEGGRHPVVEDAVARSGGRFVANDCT
LSESSRLWLVTGPNMGGKSTFLRQNALIAVLAQAGSYVPATRATLGLVDRLFSRVGASDN
LARGRSTFMVEMVETAAILAQATPRSFVILDEVGRGTSTYDGLAIAWAVVEAIHEDNRCR
CLFATHYHELTRLAERCEALTLHHVRAREWKGDLVLLHEVADGPADRSFGIAVARLAGLP
PATLKRAKAVLDKLEAGRAKTGGLAAGLDDLPLFAAVAEQEAAAVDALRDALDGLDLDAL
SPREALDTLYRLKALAREG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcaatatctcgcgctcaaggccgaagccgaggattgcctgctgttctaccgc
atgggcgacttcttcgaattgttcttcgacgacgccaaaatcgccagcgcctgcctcgac
atagcgctcactgcgcgcggcgagcatgaaggcacgcgcatcccgatgtgcggcgttccg
gtgcatgcgatggagggctatctcgcgcggctgatcaaggccgggcaccgcgtggcgatc
gccgaacagaccgagacgcccgaggccgcccgcaagcggatgggatcgaaggcgctggtc
aaccgcgcgatcgtccgagtcgtgaccgcgggcacgctgaccgaagagaccttgctcgac
agccgcagcgcaaactggtgcgtggtgatcggcgaggcgggcggccaggtcgcgatcgcc
tgcgccgatatctccacgggccgcttcgacgtcgtcgaaagcgatcccgatcgcgtcggc
gccgaaatcgcgcgcctctcccccgccgagacgatcgcgagcgacgcgacgggatttgcc
gacctcgccaacgtcctgcgcccgcgcgccgatttcgacagcgcaggcggcgaagaacgg
ctcaagcggctgttcggcgtcgcaacgctcgacggattcggcagcttctcgcgcgcggcg
ctcgccgccgcaggcgggctggttgcctatctggaacataccgccaagggttcgctgccc
ttcctgcggccgcccagcctcagccagaccgacgcggcgatggcgatcgatgcggcgacg
cgcgagagcctggagctgacgaccagcaccgccggcgcgcgcaagggcagcctgctcgac
agcgtcgatcgtaccgtcactggcgccggcgcacggctgctcggtgccgatatcgccgcg
ccgctgatggaccgccgcgcgatcgaggcgcggctcgacctcgtccggcgcttccacgac
gatagcgggctgcgcgaaagcgtgcgcgccgcgctgcgggcgctgcccgatatcggtcgc
gccttggggcggctggcggccgggcgcggatcgccgcgcgacctggggcaattgcgcgac
gggctggacggcgcatggcggctgggcgagcggctgggcgcaatcgcggacaagcccgcg
ctgctcgacgacctcgccccgatgctgcgcgggcatggcgcgctgatcgacctgctgacg
cgcgcgctggtgcccgagccgccggtcgacgcggcacagggcggctatatcgccgagggc
tatgacgccgcgctcgacgacctgcgcgattcgggtgcgggcggacgccgcgccatcgcc
gcgctggaggccgaatatcgcgcgcgcactggcatcggcgcgctcaagatccgccataac
ggcgtgctcggctatcatatcgaagtccccgcgcgcgccgccgatgcgctgatggcgcag
gacagcggcttcacccatcgccagacgctggccggcgtggtgcggttcaacgcgcccgaa
ctccacgacgtcgcgctccgcgtcacccaggcgggggcgcatgcgctggcggccgaggcc
gcgcatctcgaagacctgaccgtaaccgcgctcgatcgccgcgaaccgatcgccgcgacc
gccgacgcgctcgcgcggatcgatgtcgccgccgggctcgccgagcgcgcagccgaaggc
ggctgggcgcgccccacgctcgtcgaccatggctgtttcgagatcgaaggcgggcggcat
ccggtggtcgaggatgcggtggcgcgatcgggcgggcgcttcgtcgcgaacgactgcacc
ctgtccgaatcctcgcggctgtggctcgtcaccggcccgaacatgggcggcaaatcgacc
ttcctgcgccagaacgcgctgatcgccgtcctcgcccaggcgggcagctacgtccccgcg
acacgcgcgacgctggggctcgtcgaccggctgttcagccgcgtcggcgcgtcggacaat
ctcgcgcggggccgatcgaccttcatggtcgaaatggtcgagaccgcggcgatcctggcc
caggcgacgccgcgcagcttcgtgatcctcgacgaagtcgggcgcggcaccagcacctat
gacgggctcgccatcgcctgggcggtggtcgaggcgatccatgaggataatcgctgccgc
tgcctgttcgcgacgcattatcacgagctgacccggctcgccgaacgctgcgaggcgctg
acgctgcaccatgtccgcgcgcgcgagtggaagggcgatctggtgctgctccacgaagtc
gccgacgggcccgccgaccgcagcttcgggatcgccgtcgcgcggctggcggggctgccg
cccgcgacgctcaagcgcgccaaggcagtgctcgacaagctggaggcggggcgcgccaag
accggcgggctcgccgcggggctcgacgatctgccgctgttcgccgccgtcgccgaacag
gaggcagcggccgtggacgcactgcgcgatgcgctggacgggctcgatctcgacgcgctc
agcccgcgcgaggcgctggatacgctctaccggctcaaggcgctggcgcgcgagggatga
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