Sphingopyxis fribergensis: SKP52_00560
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Entry
SKP52_00560 CDS
T03542
Symbol
metC
Name
(GenBank) Putative cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk00270
Cysteine and methionine metabolism
sphk00450
Selenocompound metabolism
sphk01100
Metabolic pathways
sphk01110
Biosynthesis of secondary metabolites
sphk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SKP52_00560 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SKP52_00560 (metC)
Enzymes [BR:
sphk01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SKP52_00560 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJA07061
UniProt:
A0A0A7PAF6
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Position
144476..145675
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AA seq
399 aa
AA seq
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MSKSDDDSLRPATKLVQGGRRPEWTGDPRLGGGVVNPPVWRASTILYDNIADLKARGHAT
HDKLYYGRRGTPTVWALADALTGMEPGAEGTLLYPSGVAANSAGLLALLSPGDHLLMVDS
AYEPTRAFCNGMLARLGIETSYYDPLVGAGIAELIRPETKLIFLESPGSLTFEVQDVPAI
VAVARERGVLTMLDNTWATPLLFPALSHGIDVTMMSLTKYVGGHSDAMMGSLTATKAVWP
RLRSAAYQLGQAVSPDDCALILRGLRTLDVRMRRHGESGLAVASWLAGRGEVGRVLHPAL
PGDPGHAIWSRDFGGASGLFGFTLKGVDEAARTRFIDSLAHFGIGFSWGGYESLVVPSNP
ETIRTATTWTDPDPLVRLSIGLEDAADLIADLERGFSAI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagcgacgatgacagcctccgccctgcgacgaaactggtgcagggcgggcgg
cggcccgaatggaccggcgacccgcggcttggcggcggcgttgttaatccgccggtttgg
cgcgcctcgacgatcctctacgacaatatcgccgatctgaaggcgcgcggccatgcgacg
cacgacaagctctattatggtcggcgcgggacgccgacggtgtgggcgctcgccgatgcg
ttgaccgggatggagccgggcgccgagggtaccttgctctatccgtccggggtcgccgcc
aattcggcgggattgctcgcgctgttatcgccgggcgatcatctactgatggtcgacagc
gcctatgagccgacgcgcgccttctgcaatggtatgctcgcgcggctcggtatcgagacg
agctattatgatccgcttgtcggcgcgggcatcgccgaactgatccggccggagacgaag
ctgatcttcctcgaatcgccgggcagcctgacctttgaggtgcaggatgttcccgcgatc
gtcgcggtggcgcgcgaacgcggcgtgctgacgatgctcgacaacacctgggcgacgccc
ttgctctttcccgcgctgtcgcacggcatcgacgtgacgatgatgagcctcaccaaatat
gtcggtgggcatagtgacgcgatgatgggctcgctgacggcgaccaaggcggtttggcca
cgactgcgtagcgcggcgtatcagcttggccaggcggtttcgcccgacgattgcgcgctg
atcctgcgcgggctgcgcacgctcgatgttcggatgcggcgtcatggcgagagcggcctt
gcggtcgcgagctggcttgcgggccgcggcgaggttggccgcgtgcttcatcccgcgctg
ccgggcgatcccggtcacgcgatatggtcgcgcgatttcggcggcgccagcggactgttc
ggtttcacgctgaagggcgttgacgaggcagcgcggacacgcttcatcgattcgctggcg
catttcggcatcggcttcagctggggtggctatgaaagccttgtcgtgccgagcaatccg
gagacgatccgcaccgcgacgacatggaccgatcccgacccgctcgtccgcctgtcgatc
gggctcgaggatgccgccgacctgatcgcggatctcgaacgcggcttttccgcgatatga
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