Sphingorhabdus lutea: LPB140_03280
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Entry
LPB140_03280 CDS
T04602
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB140_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphl03021
]
LPB140_03280
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_03280
Enzymes [BR:
sphl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB140_03280
Transcription machinery [BR:
sphl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB140_03280
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB140_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Peptidase_C21
Motif
Other DBs
NCBI-ProteinID:
APG62002
UniProt:
A0A1L3JA44
LinkDB
All DBs
Position
668674..669021
Genome browser
AA seq
115 aa
AA seq
DB search
MARVTVEDCIDKVNSRFDLVLVAAERARQISGGDELTIDRDRDKNPVVALREIAEQTIKP
ENMKEELVQSMQKILPDEEDEADEVGSLSQSAEALRLTAAAPTRTAAVARDYDRA
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtcaccgttgaagattgtattgataaagtaaatagccgctttgatttggtt
ttggtggctgctgaacgcgcccgtcaaatttccggcggtgatgagctgaccattgaccgc
gaccgtgataaaaatcctgttgttgcgctgcgtgaaattgcagaacaaaccattaaacct
gaaaatatgaaggaagagctggttcaatccatgcaaaaaattcttcctgatgaagaagat
gaggcagatgaagttggttcattgagccagtctgccgaagcgcttcgtcttactgcggct
gcgccaacacgcactgcggcggttgcgcgggattatgatcgcgcataa
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