Sphingorhabdus lutea: LPB140_03740
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Entry
LPB140_03740 CDS
T04602
Name
(GenBank) hypothetical protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB140_03740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_03740
Enzymes [BR:
sphl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LPB140_03740
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LPB140_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
APG62070
UniProt:
A0A1L3JAA8
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All DBs
Position
782831..784378
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AA seq
515 aa
AA seq
DB search
MDLPLMPNMKNEISDHQNKLLAELGPGDNAPPFTVSELSASLKRSIEDQFGRVRIKGELS
GYKRATSGHCYFGIKDENALIDGVMWKGNANRLPFAAEDGLEIIATGKITTFPGRSKYQI
VVENMELAGEGALMMLFEKLKARLADEGLFDNGRKKKLPYLPAHIGVITSPTGAVIRDIL
HRLADRFPVRVTLWPVKVQGDGAAEEIAHAINGFSNMEKRGDLERPDLLIIGRGGGSIED
LWAFNEEAVVRAIANCTIPTISAVGHETDTSLSDYAADRRAPTPTAAAEMAVPVRSDLQQ
KLGQLALRSQNAMARGLSLASERLSTQKRLMPNLDNITAPYQQRADDAAMRLQGSFTARL
NAAELKFSALQSGLRPQILMRHWENKNQQLVKTGLKRKLADNILDKGAQKLSAFDRLLKS
LHPQKPLERGFAMITNMEGKLLPNLAEAQQFDAMKVQFADGQLSVQQIKGHKGGGDGDDN
PKKTQSVQIISSKHQLKKQVKKNINQAADNQGNLF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccccttatgccaaatatgaaaaacgaaatatcggatcatcaaaacaagctg
ttagccgagcttggccctggggacaatgccccacctttcacggtgagtgaattatcggcc
agtttgaaacgtagtatagaggatcaatttggacgggtcaggataaaaggggagctttcg
ggctataaacgtgcgacatcaggtcattgttattttgggataaaagatgaaaatgcgtta
attgatggggtgatgtggaaggggaatgccaaccgccttccctttgccgcagaggatggg
ctggaaattatcgcaactggtaaaattaccacctttccggggcggtccaaatatcaaatt
gtggtcgaaaacatggaattggcgggcgagggcgcgttgatgatgctgtttgaaaaatta
aaggcgcggctggccgatgaaggattatttgataatgggcgaaagaaaaaattgccctat
ttgcccgcgcatattggtgtcatcacttcccccacgggcgcggtgattcgcgatattttg
caccgattggccgatcgctttcccgtgcgggtgactttatggccggtaaaggttcagggc
gatggcgcggcagaggaaattgcacatgccataaatgggttttccaatatggaaaaaagg
ggcgatttggaacggcccgatttattgattattgggcgcggaggcggatcgattgaggat
ttatgggcatttaatgaagaagccgtggtgcgcgccattgcaaattgcaccatccccacg
ataagcgcggtgggccatgaaaccgataccagcctgtctgattatgccgccgatcgccgt
gcgccaacccccacggcggcggcagaaatggccgttcccgtgcgcagtgatttgcaacaa
aaattggggcagcttgccttgcgtagccaaaatgcaatggcacgcggcctttccttggca
agtgagcgtttgagcacgcaaaaacgtttaatgcccaatttggacaatattactgcgcct
tatcaacaacgcgctgatgatgccgccatgcgattacagggcagttttaccgcgcggtta
aacgcggcggagctgaaattttccgccctgcaatcaggccttcgcccgcaaattttgatg
cgtcattgggaaaataaaaatcaacaattggtcaagacgggtttgaaaaggaaattggcg
gataatattttggacaaaggcgcgcaaaaattatccgcatttgaccgtttgttaaaatcg
cttcacccgcaaaaaccgttggaacgcggctttgccatgattaccaatatggagggtaaa
ttattgcccaatctggccgaggcgcaacaatttgatgccatgaaggtgcaatttgccgat
gggcaattatctgtgcagcagataaaggggcataagggcggcggcgatggcgacgacaat
ccaaaaaaaacacaatcggttcagataatatcaagcaagcatcagttaaagaaacaggtg
aaaaaaaatatcaaccaggctgctgacaatcaaggtaatttattctaa
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