Sphingorhabdus lutea: LPB140_07300
Help
Entry
LPB140_07300 CDS
T04602
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03030
DNA replication
sphl03430
Mismatch repair
sphl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB140_07300
03430 Mismatch repair
LPB140_07300
03440 Homologous recombination
LPB140_07300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphl03032
]
LPB140_07300
03400 DNA repair and recombination proteins [BR:
sphl03400
]
LPB140_07300
Enzymes [BR:
sphl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB140_07300
DNA replication proteins [BR:
sphl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB140_07300
DNA repair and recombination proteins [BR:
sphl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB140_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
APG63686
UniProt:
A0A1L3JEY0
LinkDB
All DBs
Position
1536555..1540046
Genome browser
AA seq
1163 aa
AA seq
DB search
MPYIPLRVFSAYTMLDGAIEPKKIGEHAAKLGFPAAAITDRNGLYAVMPFQDGCTKSGVQ
PIIGSFVGITRPSRGGEEQNDRGAAISDWIGLYAQNDMGYENLCRIVSRAHLGSEGLSNP
QIDFEFLRAHHHGLIALTAGHEGGLTRLCAQGQLDDAAKYLDNLQEIFGDRLYIELCRRN
HETEIAAEPHLIKFALDRNIALVATNPACYAEPSFHEAHDAMLCIAEGTYVSSDDRKKSC
PQAWLKTDRQMMEIFADIPEAIKNTAIVAKRCTAAAPYRKPILPSIAGDRDAEDAQLRKD
ALEGLEARFVERNITDEAVKKAYYDRLEFELNVICNMGFPGYFLIVADFIKWAKNEDIPV
GPGRGSGAGSLVAWVLTITGLDPLELGLLFERFLNPDRVSMPDFDIDFCETHRTKVILYV
QQKYGVDQVAQIITFGKLKARAVLRDTGRVLQMSYGHVDRLCKLVPNHPTDPWDLQKALS
GVAELREEYRRDQDVARLFDLALKLEGLPRHSSTHAAGVVIGDRPLAQLVPLYRDPRSDI
PVTQFDMKFVEIAGLVKFDFLGLKTLSVLKKAVDLLKVRGINVDLETLVLDDEKVYELLQ
RGDTVGVFQLESEGMRRTLSAVKPTNFGDIIALVSLYRPGPMDNIPMFGRRKNGEEDIAY
PHPLLEGILKETYGIFVYQEQVMQAAQILAGYSLGEADLLRRAMGKKIQAEMDVQRKRFV
DGCAEKAINASQANSLFDLIDKFAGYGFNKSHAAAYALLAYQTGWLKTHYPYEFYAASMC
FDMHQTDKLAIFADDMRRNKITCLGPCVNHSSASYIVEQNDDGLAVRYALAGLKNVGQKA
MEQIVVERKNNGPFTDINDFANRVDSSQLNKRQVENLACAGAFDSIYADRAAIFSSAEMI
ISVAQTAQQERISGQGGLFAGEEENSGFAGNIIQQCTPWDISEKMQNEKHAFGFYFAAHP
MEQYRAVAEAKGASSYALLCNSGPIAEGVKKNAKMAAMVEAVRWRESKRGNRFVVVEMSD
QSGQFSASCFEEEMGKKLAEQAEKSACLLFSLELDMKAGEETPRFTIKSFQSLEILAKTV
STTLELYLSSDNNLSMLSTLLTRSGEGRGVVLAKMPAGQNKIATMLLGRNFKFDADILEE
IKALEGVDTAEITANNKHLQIVS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgccctatattcctcttcgtgttttttctgcttatacgatgctggatggtgcgattgag
ccaaagaaaattggtgaacatgcagcaaaattgggctttccggcagcggcgataactgat
cgtaacggtttatatgccgtaatgccatttcaagatggttgcaccaaatccggggttcag
cccattattggcagttttgttggaattacccgtccttcgcggggcggtgaagaacaaaat
gatcgcggcgcggcaatatcagattggattggtttatatgcgcaaaatgatatgggatat
gaaaatttatgccgtatcgtgtcaagagcgcatttaggatcagaaggtttgtcaaatccg
caaattgattttgaatttttgcgtgcgcatcatcatggtttaatcgctctgacagcaggg
catgagggtggattgacccgcctatgcgcacaggggcaattggatgatgcggcaaaatat
cttgataatttacaggaaatttttggcgaccgtttatatattgaattatgccgccggaac
catgaaaccgaaatcgctgcagagccgcatttaattaaatttgctctggaccgaaatatt
gctttggttgcgacaaatcctgcctgctatgctgaaccttcatttcatgaggcgcatgac
gcgatgctttgcattgccgagggcacatatgtcagcagtgacgataggaagaaaagctgt
cctcaggcatggttgaaaaccgatcgtcagatgatggaaattttcgccgatattccagag
gcaataaaaaataccgctatagtggccaaaagatgcaccgcagcagcgccatatcgcaag
ccgatattaccctctattgcgggtgacagagatgctgaggatgcgcagcttcgtaaagat
gctttagaagggttggaagcccgctttgttgaaagaaatattacggatgaggccgtcaaa
aaagcatattatgatcggttggaatttgaattaaatgttatttgtaacatgggctttcct
ggctatttcttaatcgtagccgattttattaaatgggcaaaaaatgaggatattcccgtg
gggccgggccgtggttcaggtgcgggttcattggttgcatgggtgcttaccattactggt
ttggatccgttggaattgggattgctgttcgaacgctttttaaacccggaccgtgtgtcc
atgcccgatttcgacattgatttttgcgagacacatcgaacaaaggttattttatatgtt
cagcaaaaatatggcgttgatcaagtcgcgcagattattacctttggtaaattaaaggcg
cgtgcggttcttcgtgatacggggcgcgtattgcaaatgagctatggtcatgttgaccgg
ctttgtaaattggtacccaatcatcccactgacccatgggatttgcaaaaggcattgtcg
ggcgtcgctgaactgcgcgaagaatataggcgtgatcaagatgttgcccgattatttgat
ttggcattgaaattagaaggcctaccaaggcatagctccacccatgctgctggtgtggtc
attggtgataggccgttggcgcagcttgtacccctatatcgcgacccgcgttctgatatt
cccgtcacgcaatttgacatgaaatttgttgaaattgcggggcttgttaaattcgacttt
ttgggacttaaaacgctgtctgttttgaaaaaggcggttgatttgttaaaggttcgcggc
atcaatgttgatttagagacattggttctggacgatgaaaaagtatatgagctgttacag
cgcggtgatactgtgggggtgtttcagctggaatctgaaggaatgcgccgcactctttcc
gccgttaagccgacaaattttggtgatattatcgcacttgtctccctttatcggcccggc
ccaatggataatatccccatgtttggacggcgtaaaaatggtgaagaagatattgcctat
ccgcacccattattagaggggatattgaaagaaacctatggtatttttgtttatcaagaa
caggtaatgcaggcggcgcaaatccttgctggatatagccttggtgaggcagatttgctt
cgccgcgccatgggtaagaaaattcaggcggaaatggatgtgcagcgtaaaagatttgtc
gatggctgcgccgaaaaagccattaatgccagccaagccaatagtttatttgacttaatt
gacaaatttgccggatatggttttaacaaaagccatgctgctgcctatgctcttttggca
tatcagacaggctggcttaaaacgcattatccttatgaattttatgcagcgtcaatgtgt
tttgatatgcatcaaaccgataagctagcgatttttgccgatgatatgcggcgtaacaaa
atcacttgtcttggcccatgtgtcaatcacagctcggcaagttatattgtggagcaaaat
gatgatgggcttgccgtgcgctatgccttggccggtcttaaaaatgttgggcaaaaggcg
atggagcaaattgtcgttgagagaaaaaataatggcccatttaccgatattaatgatttt
gcaaatcgggtggatagcagccagttaaacaaaagacaggtggaaaatttggcctgtgcc
ggtgcatttgacagcatatatgccgatagagcggcgatattttccagcgcggaaatgatt
atttcggttgcccaaaccgcacagcaggaacgtatttcagggcagggcggcctgttcgcc
ggagaagaagaaaattctggatttgcaggcaatattatccaacaatgcaccccatgggat
atttccgaaaaaatgcaaaatgagaaacatgcatttggtttttattttgcagcgcaccca
atggaacaatatcgcgccgttgctgaggcaaagggcgcaagttcatatgccctgctttgt
aatagcgggcctatagccgaaggtgtgaagaaaaatgccaaaatggcagcgatggtggag
gctgttcgttggcgcgaatccaaacgcggaaatcgttttgttgttgtggaaatgtccgac
caaagcgggcaattttcggcaagctgttttgaagaggaaatgggcaaaaaattggcagaa
caggccgaaaaatctgcctgtctcctattctctttagaattggatatgaaggcaggggag
gaaacgccgcgatttaccattaaatcatttcagtcattggaaattttggcgaaaacagtt
tccacgacattggagctttatttatcgagcgataataatttatccatgctgagcacatta
ttgacccgttcaggcgaagggcgcggtgtggttttggccaaaatgcccgcaggacagaat
aaaattgccaccatgttattgggaagaaatttcaaatttgatgccgatattttagaggaa
ataaaggcattggagggtgtggatacagccgaaattacggcaaataacaaacatcttcaa
attgtgagttaa
DBGET
integrated database retrieval system