Sphingopyxis sp. 113P3: LH20_18485
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Entry
LH20_18485 CDS
T04069
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LH20_18485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_18485
Enzymes [BR:
sphp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LH20_18485
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LH20_18485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
ALC13949
UniProt:
A0A0M3QE74
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All DBs
Position
complement(3748361..3749797)
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AA seq
478 aa
AA seq
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MSIPFPDPASDNDPAARLLAEAATGDNAPALSVSQLSAAIKRTVEDGFARVRVRGELSGA
KRAASGHFYAGLKDDNALIDMVMWKGQAARLAFRPEDGIEVIATGKLTTYPGRSKYQLVV
ESLEVAGEGALMLLFEKLKARLGAEGLFDRERKQRLPYLPRTIGVVTSPTGAVIRDILHR
LADRCPTRVIVWPVLVQGEGAAAQVANAVRGFDALAPGGPVPRPDLVIVARGGGSIEDLW
AFNEEVVVRAIADCRIPTISAVGHETDVTLADHAADVRAPTPTAAAEMAVPVRAELMAQL
ATWRGRMIGAANRTHALRGERLAALARHLPRRDALYAPQRQRLDDAGDKLDRCQRHRLAV
TAERLASRSAALRPALLARAWDRDRARLQGLARLLASLDPRALLSRGYAMVRDSRGAIVT
HAAGARAAGNLRLQFADGEVPVAVDAGSDPTSAASPAPAPKALRRAAPPPRREQGELF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccttttcccgatccggcgtccgacaacgaccccgcggcgcggctgttagcc
gaggcggcgacgggcgacaatgctccggcgctttcggtcagccaattgtcagctgcgatc
aagcgcacggtcgaggatggttttgcgcgcgttcgggtgcgcggcgagctctcgggggcg
aagcgcgcggcgtcggggcatttttatgccgggctcaaggacgataatgcgctgatcgac
atggtgatgtggaaggggcaggccgcgcgactcgccttccggcccgaagacgggatcgaa
gtgatcgcgaccggcaagctcaccacctatccgggccgttcaaaatatcagctcgtcgtc
gagagcctcgaagtcgcgggcgaaggcgcgctgatgctgctcttcgagaaattgaaggct
cggctgggggccgaagggctgttcgaccgcgagcgcaaacagcgtctcccctatctgccg
cgcacgatcggcgtggtgacctcgcccacgggcgcggtgatccgcgacatcctccaccgg
ctggccgaccgctgcccgacgcgggtcatcgtctggccagtcctggtgcagggcgagggt
gcggcggcccaggtcgcgaatgcggtgcgcgggtttgacgcgctcgcccccggcgggccg
gtgccgcgccccgacctggtcatcgttgcgcgcgggggcggctcgatcgaggatctgtgg
gcgttcaacgaagaggtggtcgtgcgcgcgatcgccgattgccgcatccccacgatcagc
gcggtggggcacgagaccgacgtgacgctcgccgaccatgctgccgatgtgcgcgcaccg
acgcccactgcggcggccgagatggctgtgccggtacgcgccgagctgatggcgcagctt
gcgacatggcgcggacgcatgattggcgcggcgaatcgaacgcatgcgctccgcggcgag
cggctggcggcgcttgctcggcacctcccgcggcgcgatgcgctctatgcgccccagcgg
cagcggctcgacgatgccggggacaagctcgatcgctgtcagcggcaccgcctcgcggtc
accgccgagcggctggcgagtcggtcggcggcgctgcgaccggcgctgctcgcgcgcgcg
tgggaccgcgaccgcgcccggcttcagggcctcgcgcggctgctcgcctcgctcgacccg
cgcgcgctcctgtcgcgcggctatgcgatggtgcgcgactcgcggggcgctatcgtcacc
catgccgcgggggcgcgcgctgcgggaaatctgcggcttcagtttgccgacggcgaggtg
ccggtggcggttgacgccggaagtgaccccacttccgcagcgagcccggcgcccgctccc
aaagcgctgcgccgcgccgcgccgccgccccggcgagagcagggcgagctcttctga
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