Sphingopyxis sp. 113P3: LH20_21950
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Entry
LH20_21950 CDS
T04069
Symbol
cobN
Name
(GenBank) cobalamin biosynthesis protein CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00860
Porphyrin metabolism
sphp01100
Metabolic pathways
sphp01240
Biosynthesis of cofactors
Module
sphp_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LH20_21950 (cobN)
Enzymes [BR:
sphp01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
LH20_21950 (cobN)
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GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ALC14635
UniProt:
A0A0M4D2X1
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Position
unnamed:complement(32144..35428)
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AA seq
1094 aa
AA seq
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MHVIFRETHGMEETAVPQDLGQEPADLVVLSFSDSDLGAFAAAWHQARADDATFPSLRLA
NLAALMHPLSVDTYAERTLSGAKAILIRLIGGTPYWSYGLQQVEALARSRGIVLAVLPGD
GFEDARLDAASTVPVTALRELAQWCDAGGARAAQAALAALSQLAGLIDAPARTFDPLLMA
GGWHPGRGVIDLEAFARDPARPLVLIVFYRSYLTAHDLDPFAALHTAFEQRGFDALSIFV
PSLKAPQVREQVDRWVRGLGPAAIINATAFSARGDDGATPLDGAGVPVFQLALATSGRAG
WAAASRGLSPADLAMHVVLPEIDGRVFAGVASFKEAGTRDPALGFARTIHRADAGRVGAI
TARVAGWIALAQTPVAERRVALVLSTYPGKTYQMAHAVGLDALASAEAILADLAEAGYAT
DAQAGLAALLQCTHQHWPMAEYRKALAALPDTLRAELFAAWGEPEADAAAADGAFRFAAL
PIGNALVALQPERGERAHRDGDYHDLSRCPRHGYVAFYLWLRQRSVDALVHIGAHGTLEW
LPGKSVALSDACWPEALTGAMPVIYPFIVNDPGEAAQAKRRISAVTIGHVPPPLVQTQSG
AGLARIEALLDEFSNAGGLDPARRDRLQVNIRDEARVLGLEAELGLDDAATLVEAITRID
RFVCDVKDSQFGDGLHVFGRGDQGAAERAGLLAALDGRRVPPGPSGSPFRGRSDVLPTGR
NLYAIDPRAVPSRAAHAQGVTLAEELIRRHLQDHGDYPRGLVVDLWGSATMRTAGEEFAM
ALHLLGAKPLWDTASERVTGIEILPLALLDRPRIDVTLRISGLFRDAFPALPILFGQAVR
ALCLCDEPADWNPFAGQAAAPRVYGPAPGSYGLGLGDAAEVYTEAARRAAGEAWLAASDH
AFDAASDAIGTFADPDGLRQRVEGADAFVHLQDLPETDLLLAADYAAHEAGFAAAKALIG
GSAALYHLDNRDPGRTVARTLTEEIARVVRARAAHPGWVAGMMRHGFRGGAELAATLDHM
GAFAHLSGSVPPHLFDLYHDATLGQTDVRAFLERENPAALAAMEARFAALHAAGLWQTRR
NSILASLPRLEDRA
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcattttccgcgaaacgcacgggatggaggaaaccgccgtcccgcaggatctg
gggcaagagcccgcggatcttgtggtcctgtccttttcggacagcgatctgggggcgttc
gcggcggcatggcatcaggcccgtgcagacgatgcgacatttccttcgctgcggctcgcc
aatctggcggcgctgatgcatccgctgtcggtcgacacgtatgccgagcggacgctgtcg
ggcgcaaaggcgatcctgatccggctgatcggcggcacgccctattggagctacgggctg
caacaggtcgaggcgctggcccggtcgcgcgggatcgtgctggccgtgctgcccggcgac
ggctttgaggatgcgcggctggatgcggcctcgaccgtgccggtgaccgcgttgcgcgaa
cttgcgcagtggtgcgatgctggcggtgcaagggcggcgcaggcggcgcttgccgcgctg
tcgcagctggcggggctgattgatgcccccgcccggacattcgatccgctgctgatggcg
ggaggctggcatcccggccggggcgtgatcgatcttgaagcctttgcgcgcgatcccgca
aggccgctggtcctgatcgtgttctatcgttcttacctgaccgcccacgatctggaccca
tttgccgccctgcataccgcgttcgagcagcgcggtttcgatgcattgtcgatcttcgtc
ccctcgctgaaagccccgcaggtgcgcgaacaggtggaccgctgggtgcgcgggcttggc
ccggcagcgatcatcaacgctaccgctttttccgcgcggggcgatgacggcgccaccccg
cttgatggcgcgggcgttcccgtgtttcagctggcgctggccacgtccgggcgcgcggga
tgggcagcggcttcgcgcgggctttccccggcagaccttgccatgcacgtggtcttgccc
gaaattgacgggcgggtgtttgcaggcgtcgccagcttcaaggaggcggggacgcgcgat
cccgcgcttggctttgcccgcaccatccatcgcgccgatgcaggccgggttggggcgatc
accgcgcgggtggcgggctggatcgcacttgcccaaacgccggttgcagaacggcgggtt
gcgctggtcctgtctacttatcccggcaagacataccagatggcccacgccgtggggctg
gatgcgctggcttctgccgaggcgatcctggccgatctggccgaggcgggatatgccact
gacgcgcaggccggactggcagcgctccttcaatgcacacatcagcactggccgatggca
gagtaccgcaaggctttggcagcactgcccgataccctgcgcgctgaacttttcgccgca
tggggcgagccggaagccgatgctgccgccgccgatggcgcgttccgttttgccgcgctg
cccatcggcaacgcgctggtagccttgcagcccgaacgcggcgaacgcgcccatcgcgac
ggcgactatcacgacctgtcccgctgcccgcgccatggctatgtggcgttctacctgtgg
ctgcgccagcgaagcgtggacgcgctggtgcatatcggcgcacatggcacactggaatgg
ctgccgggcaaatcagtcgcgctgtccgatgcttgctggcccgaggcgctgaccggcgcg
atgccggtgatctatccgttcatcgtcaacgatcccggcgaagcggcgcaggccaagcgc
cggatcagcgcggttacgatcgggcacgttcccccgccactggtgcaaacgcaaagcggt
gcggggctggcccggatcgaggcgctgctggatgaattctccaacgctggcgggctggac
ccggcccgccgcgaccgtctgcaagtgaacatccgcgacgaagcgcgcgtgctgggactt
gaggcggaactgggccttgatgacgcggccacgctggtcgaggcgatcacccggatcgac
cgcttcgtttgcgatgtaaaggacagccagttcggtgacgggctgcatgtgttcgggcgg
ggagatcagggcgcagccgagcgggccggattgctggcggcactcgacggacgccgcgtt
ccgcccggtccctccggctccccctttcgcgggcgcagcgatgtgctgccaaccgggcga
aacctttatgcgatagacccgcgcgccgtgccttcacgcgcggcccatgcccaaggggtg
acactggcagaggagctgatccggcggcatctgcaggatcacggcgattatccgcgcggg
ctggtggtcgatctgtggggatcggccacgatgcgcacggcgggcgaggaattcgccatg
gcgctgcacctgctgggcgcaaagccgctgtgggacaccgcgtccgaacgggtaacaggc
atcgaaatcctgccgctggcgctgctggaccggccgcgtatcgatgtgacgttgcggatt
tccggcctgttccgcgatgcctttcctgcgctgccgatactgtttggccaagcggtgcgc
gcgctgtgtttgtgcgatgaaccggcggactggaacccgtttgcagggcaggctgcggca
ccgcgcgtctatggcccggcccccggcagctatggactgggtcttggcgatgcagccgag
gtctatactgaagcggcccggcgcgctgctggtgaggcatggctggcggcatcggaccat
gcgtttgacgcagcctccgatgcgatcggaacctttgccgatcctgacggcctgcgccag
cgtgttgaaggagcggacgcctttgtccatcttcaggacttgcccgaaaccgatctgctg
ctggccgccgattatgccgcgcacgaggcgggctttgccgctgccaaggcgctgatcggt
ggttcggcggcgctctaccacctcgacaatcgcgatccggggcgcaccgttgcgcgcacc
ctgaccgaagagatcgcccgcgtggtccgcgcccgcgcggcgcacccaggctgggtggcg
ggcatgatgcggcacggctttcgcgggggggcagaactggccgcgacgctggaccatatg
ggtgcctttgcgcacctttcaggcagcgtaccgccgcatctgttcgacctttatcacgac
gcgacactgggccagaccgatgttcgcgcatttcttgaacgcgagaatccggctgcgctg
gcggcgatggaagcccgctttgccgcgctccatgccgccgggctgtggcagacccggcgc
aattccatcctcgccagcctgccaaggcttgaggacagggcatga
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