Sphingosinicella sp. BN140058: ETR14_25515
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Entry
ETR14_25515 CDS
T05826
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphs
Sphingosinicella sp. BN140058
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphs03032
]
ETR14_25515 (topA)
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_25515 (topA)
Enzymes [BR:
sphs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ETR14_25515 (topA)
DNA replication proteins [BR:
sphs03032
]
Prokaryotic type
DNA Topoisomerases
ETR14_25515 (topA)
DNA repair and recombination proteins [BR:
sphs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETR14_25515 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QAY79530
UniProt:
A0A4P6FRJ9
LinkDB
All DBs
Position
complement(5612915..5615494)
Genome browser
AA seq
859 aa
AA seq
DB search
MKLVVVESPAKAKTIEKYLGSGYRVLASYGHVRDLPAKDGSVDPDAGFAMEWETYADKAR
QLKAISDEAKGADALILATDPDREGEAISWHVQEVLRKRRVLPKDVERVTFNAITKTAVT
EAMQKPRALDEDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVDRE
REIELFKAQEYWSVTAFMEADGQEFMARMVRFNGAKLDRLSIGDKGMADAAKAAVEAGHF
TVTSVETKPLSRNPPAPFTTSTLQQEAARKLGFSASHTMRVAQGLYEDGAITYMRTDGVQ
MAPEAISAARKAVADRFDAGYVPDKPRHYETKAKNAQEAHEAIRPTDFGKDRAGSGDHAR
LYDLIWKRALASQMASARLERTTAELADGTGQHALRATGQVVLFPGFLALYEEGRDDEQD
EDARRLPRLRQGDAPAKKRVASEQHFTQPPPRYSEASLVKKMEELGIGRPSTYAAILQTL
KDRGYVLLEKNRFTPEESGRLLTAFLERFFERYVSYDFTAHLEDELDDVSGGRAQWQKVL
EAFWRDFKPKTVEIMEQKPSEVTAALDEFLAPWLFPDKEDGSDPRVCPACGEGRLALRGG
RFGAFVACSNYPDCKFTRKFGQGGDEAGAADAGPAILGTDPETGQEVSLRTGRFGAYVQL
GDGKEAKRGSIPKDIGQAAVDLDQALRLLSLPRTIGLHPETGNPITASIGRYGPYLAHDG
KYARLSSTADVFETGMNAAVVKLAEAAAGGGRGRGAAREPLKILGPHPRTEAEIKLMEGR
FGAYVTDGTTNATLPKSVQPDALTLEEAAQLIDDRAAKGAPAKKGRKAPAKKAAAAKDGT
KKAPAKKAPAKKAAVKKKD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcgtcgtcgaatccccggccaaggccaaaaccatcgagaagtatctgggc
agcggctaccgcgtgctggcctcttacggtcacgtccgcgatctgcccgcgaaggacggt
tccgtcgatcccgacgccggtttcgcgatggagtgggagacctatgccgacaaagcgcgg
cagctgaaggcgatcagcgacgaggcaaagggcgccgacgcactgatcctcgccaccgac
cccgaccgcgagggcgaggcgatcagctggcacgttcaggaagtgctgcgcaagcggcgg
gtgctgcccaaggacgtcgagcgcgtgaccttcaacgcgatcaccaagacggcggtgacc
gaggcgatgcagaagccgcgggcgctcgacgaagatctgatcgatgcctaccgggcgcgc
cgcgcgctcgactatctggtcggcttcactctgtcgccggtgctctggcgcaagctgccg
ggcgcgaaatcggccggacgcgtgcagtctgtggcgctgcgcctgatcgtggatcgcgag
cgcgagatcgagctgttcaaggcccaggaatattggagcgtcaccgccttcatggaggcg
gacggccaggaattcatggcgcggatggtccgcttcaacggtgccaagctcgatcggctg
agcatcggcgacaagggcatggccgacgccgccaaggctgcggtcgaggccggccatttc
accgtcaccagcgtcgagaccaagccgctcagccgcaatccgccagcacccttcaccacc
tcgaccctgcagcaggaggcggcgcgcaagctcggcttctccgcaagccacacgatgcgg
gtggcgcaggggctctacgaggacggcgcgatcacctacatgcggaccgacggcgtgcag
atggcgcccgaagcgatctccgcggcccgcaaggcggtcgccgatcgcttcgacgccggc
tacgtgccggacaagccgcgccattacgaaaccaaggccaagaacgcccaggaagcccac
gaggcgatccggccgaccgatttcggcaaggaccgcgccggctcgggcgatcatgcccgg
ctctacgacctgatctggaagcgggcgctcgccagccagatggcgtcggcgcggctcgaa
cgcaccacggccgaactcgccgacggcaccggtcagcatgctcttcgtgcgaccggccag
gtcgtgctcttccccgggttcctcgctctctacgaggagggccgggacgacgagcaggac
gaggatgcgcgtcggctaccgcggctgcggcagggcgacgcgcccgccaagaagcgggtc
gcctccgagcagcacttcacccagccgccgccgcgttattcggaagcgagcctggtcaag
aagatggaggagctcggcatcggccgtccttccacctacgcggcgatcctccagaccttg
aaggatcgcggctacgtcttgctcgagaagaaccgctttacccccgaggagagcggacgg
ctgctgaccgcctttctggagcgcttcttcgagcgctacgtctcctacgatttcactgcc
cacctcgaggatgagctcgacgacgtgtccggggggcgtgcgcagtggcagaaggtgctc
gaagccttctggcgcgatttcaagcccaagacggtcgagatcatggagcagaagccgtcg
gaggtgacggccgcactggacgagttcctggcgccctggctgttcccggacaaggaagac
ggcagcgatccgcgcgtgtgcccggcctgcggcgagggtcggctggcgctgcgtggcggt
cgcttcggcgcgttcgtcgcctgctccaattatcccgactgcaagttcacccgcaagttt
ggccagggcggcgatgaggctggtgccgccgatgccgggcccgcgatcctcggcaccgat
ccggaaaccgggcaggaggtcagcctgcgcaccggccgcttcggcgcctatgtgcaactc
ggcgatggcaaggaggccaagcgcggctcgatccccaaggatatcggccaggccgcggtg
gatctcgaccaggcgctgcgcctgctctcgctgccgcggacgatcggcctgcatccggag
accggcaatccgatcaccgcctcgatcggccgctacgggccctatctcgctcacgacggc
aaatatgcccgtttgagctcgacggccgacgtgttcgagacgggcatgaacgccgccgtg
gtcaagctcgccgaggccgccgcgggcggtgggcgcggtcgcggcgccgcccgggagccg
ctcaagatccttggtccgcacccgcgcaccgaggccgagatcaagctgatggaaggccgc
ttcggagcttatgtcaccgacggcaccaccaacgcgaccctgcccaagtccgtgcagccg
gatgccctgaccctcgaggaggccgcccagctgatcgacgatcgtgcggccaagggcgca
cccgccaagaagggccgcaaggcacccgccaagaaggctgccgcggccaaggacggcacc
aagaaggcacccgccaagaaggcgccggcgaagaaggccgcggtcaagaagaaggattga
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