Sphingobium sp. TKS: K426_11295
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Entry
K426_11295 CDS
T04965
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
Organism
spht
Sphingobium sp. TKS
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_24
Sigma70_ECF
HTH_23
HTH_5
HTH_10
DUF6752
MarR_2
HTH_20
UPF0122
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AMK23197
UniProt:
A0A126RM30
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Position
1:2250168..2250710
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AA seq
180 aa
AA seq
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MFVVNGPQDGAAPRLVSEAHGDAIEALFRVEGPRLQRYIRRRLHSGEDVCDLVQEAFVRL
AQVAREAMPARPAAYLQRIARNLLIDRSRREIHSAVLRVVQDIAVPATQEDGLRLNDVMQ
TYEATLAVMPERTRTVFLLYRVEELCYREIAARLGISIPAVQKHMAKALERIALALLDEA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcgtgaacggcccgcaagatggcgccgcgcctcggctggtttcagaggcacat
ggcgacgccatcgaggcgctgttccgcgtcgaagggcctcggctgcaacgctatatccgc
cgacggttacactcgggcgaagatgtctgcgatctcgttcaggaggcatttgtgcgactt
gcccaggtcgcgcgtgaagccatgccggcgcggcccgccgcctatcttcagcgcattgca
agaaacctcctgatcgaccgctcacgacgagaaatccactcagccgttcttcgcgtcgtc
caggacattgccgtgccggcaacgcaggaagacggcttgcgcctgaacgatgtgatgcag
acttatgaggccacattggcggtcatgcctgagcgcacacgcaccgtgtttctgctctat
cgggtcgaagagctgtgctaccgggagatcgcggcgcggctgggtatcagcatcccggcc
gtacagaagcacatggcgaaggcattggaaagaatagcgcttgcgttgctcgatgaggct
tga
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