KEGG   Sphingobium sp. TKS: K426_16580Help
Entry
K426_16580        CDS       T04965                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
spht  Sphingobium sp. TKS
Pathway
spht00473  D-Alanine metabolism
spht00550  Peptidoglycan biosynthesis
spht01100  Metabolic pathways
spht01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:spht00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    K426_16580 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    K426_16580 (ddl)
 09160 Human Diseases
  09168 Drug resistance
   01502 Vancomycin resistance
    K426_16580 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:spht01011]
    K426_16580 (ddl)
Enzymes [BR:spht01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     K426_16580 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:spht01011]
 Precursor biosynthesis
  Amino acid ligase
   K426_16580 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID: AMK24248
UniProt: A0A126RPY2
LinkDB All DBs
Position
1:complement(3356315..3357274)
Genome map
AA seq 319 aa AA seqDB search
MSRGPWHVAVLMGGWSAERPVSLSSGEGVAKALESRGHKVTRIDMGRDVALRLSETRPDV
VFNALHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGHIV
SSESLFEADPLPRPYVVKPVNEGSSVGVAIVTQDGNYGSPIGRDVEGPWLHFDELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPAEIPNEIAEACKAIAL
RAHQLLGCKGASRSDFRWDDNQGIEGLFLLEVNTQPGMTPLSLVPEQAAKLGIDYAELVE
RIVEDALKGKQRAKGADHG
NT seq 960 nt NT seq  +upstreamnt  +downstreamnt
gtgagccgtggcccttggcatgtcgccgtcctgatgggtggctggtccgccgagcggcct
gtttcgctgtcgagcggcgagggcgtcgccaaggcgctggaatcgcgcggccataaggtc
acgcgcatcgacatgggccgcgacgtggccctgcgcctctccgaaacgaggcccgatgtc
gtgttcaacgccctccacggcgtccctggcgaggatggcacggtgcagggcatgatggat
ctgatgggcctcacctacacccattcgggcctcgccacatcggtcatcgccatcgacaag
caacttaccaagcaggcgctggtgccccatggcatccccatgcccggcggccatatcgtg
agcagcgaaagcctgttcgaagccgatccgctgccgcgcccctatgtggtgaagccggtc
aatgagggcagctcggtcggcgtcgccatcgtgacgcaggacggcaattacggctcgccc
atcggccgggatgtcgaggggccgtggctgcatttcgatgagctgctggccgaaccctat
attcgcggccgggaactgacgaccgccgtgctgggcgatgaggcgttgctggtgacggaa
ctgcgcccgaaaagcggcttctacgatttcgacgccaaatataccgacggcatgaccgag
catgtctgcccggcggagattcccaacgagatcgcggaagcctgcaaggcgatcgctctg
cgcgcccatcaactgctgggctgcaagggcgcgtcgcgctccgatttccgctgggacgac
aatcaggggatcgaggggctgttcctgctcgaagtgaacacccagccgggaatgacgccc
ttaagccttgttcccgaacaggcggcgaagctgggcattgactatgccgagctggtggag
cgtattgtcgaggacgcgttgaaggggaagcagcgcgcaaagggggcagatcatggctga

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