Uncultured Sphingopyxis sp. UC10: SPPYR_0914
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Entry
SPPYR_0914 CDS
T05531
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00470
D-Amino acid metabolism
sphu00550
Peptidoglycan biosynthesis
sphu01100
Metabolic pathways
sphu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPPYR_0914 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPPYR_0914 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SPPYR_0914 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphu01011
]
SPPYR_0914 (ddl)
Enzymes [BR:
sphu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SPPYR_0914 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphu01011
]
Precursor biosynthesis
Amino acid ligase
SPPYR_0914 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Rimk_N
Motif
Other DBs
NCBI-ProteinID:
SBV32034
UniProt:
A0A1Y5PXR4
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All DBs
Position
SPPYR:988443..989369
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AA seq
308 aa
AA seq
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MSRGPWHVAVLMGGWSAEREVSLMSGKGIADALESRGHRVTRIDMDRDVALRLADAKPDV
VFNALHGVPGEDGTVQGMLDLMGLKYTHSGLVTSVIAIDKELTKQALVPHGIPMPAGTMV
DSESLFSVDPLPRPYVLKPVNEGSSVGVAIVRDDSNYGNPIARDAVGPWQEFDRLLAEPF
IKGRELTVAVLGDQALGVTELRVKSGFYDYDAKYTDGLTEHVCPADVPADVAQRMKDLAL
QAHRLLGCKGASRSDFRWDDEHGLAGIFLLEVNTQPGMTPLSLVPEQARAVGMDYAELVE
RIVGEALI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggtccgtggcatgtcgccgtcctgatgggcggctggtccgccgagcgcgaa
gtgtcgctgatgagcggcaagggcatcgccgacgcgctcgaatcgcgcgggcatcgggtc
acgcgcatcgacatggaccgcgacgtcgcgctgcggctcgccgacgcgaagcccgacgtc
gtgttcaacgcgctccacggcgtcccgggcgaggatggcaccgtgcagggcatgctcgac
ctgatgggcctcaaatatacccacagcggcctcgtcacctcggtgatcgcgatcgacaag
gaattgacgaaacaagccttggtgccgcatggaatccccatgccggcggggacgatggtc
gacagcgaaagcctcttttcagtcgaccccttgccgcgcccctatgtgctgaaacccgtc
aacgaaggctcgtcggtcggcgtcgcgatcgtcagggacgacagcaattacggcaacccg
atcgcgcgcgatgcggtggggccgtggcaggaattcgaccgcctgctcgccgaacccttc
atcaagggtcgcgagctgaccgtcgcggtgctcggcgaccaggcgctcggcgtgaccgag
ctgcgcgtcaagtcaggcttctacgactatgacgccaaatataccgacggcctcaccgaa
catgtctgccccgccgacgtccccgccgacgtcgcgcagcggatgaaggatctcgcgctt
caggcgcaccgcctcctcggctgcaagggcgcctcgcgctcggattttcgctgggacgac
gaacatggcctcgcgggcatcttcctgcttgaggtcaacacccagcccggcatgacgccg
ctcagcctcgtgcccgaacaggcgcgggcggtgggtatggattatgccgaactcgtcgaa
cgcatcgtgggggaggcgctcatatga
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