KEGG   Sphingorhabdus sp. YGSMI21: CHN51_00790
Entry
CHN51_00790       CDS       T05308                                 
Name
(GenBank) hypothetical protein
  KO
K06236  collagen type I alpha
Organism
sphy  Sphingorhabdus sp. YGSMI21
Brite
KEGG Orthology (KO) [BR:sphy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sphy00536]
    CHN51_00790
Glycosaminoglycan binding proteins [BR:sphy00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   CHN51_00790
SSDB
Motif
Pfam: Collagen DUF4763
Other DBs
NCBI-ProteinID: ATW02226
UniProt: A0A2D3R980
LinkDB
Position
174267..177134
AA seq 955 aa
MTRVFPATLSGDTDDLFSTLVSNPNRTSIQRGEIKMKINNHATIASKGRKQLLAILLHSS
SIALVALASSAVHSQEAMAQVGEPGPPGPPGPEGPVGPQGPQGPEGDAGADGAPGRPGPP
GPQGPEGDAGTDGADGGPGPTGPQGVPGPKGPAGETGAQGVPGPKGDPGETGAQGVPGPK
GEAGETGPQGVPGRKGDPGETGAQGVPGPKGPAGETGAQGVPGPKGDPGETGAQGVPGPK
GEAGEAGPQGVPGRKGDPGETGAQGVPGPKGEAGEAGPQGVPGRKGDPGETGAQGVPGPK
GEAGETGAQGVPGPKGEAGETGAQGVPGPKGPAGETGAQGVPGPKGETGETGAQGVPGPK
GPAGETGAQGVPGRKGDPGETGAQGVPGPKGETGETGAQGVPGPKGPTGETGATGPVGAD
GAVGPAGPVGATGPAGADGATGPAGATGAAGPKGDTGATGPTGLTGKPGADGAVGPAGPV
GATGPAGADGATGPVGATGAAGPKGDTGATGPTGLTGKPGADGAVGPAGPVGATGPAGAD
GATGPAGATGAAGPKGDTGAPGADGATGATGATGPAGADGAVGPAGPVGATGPAGADGAT
GPAGATGAAGPKGDTGAPGADGATGATGATGPAGADGAVGPAGPVGATGPAGPAGADGAD
GAEGPAGKDGSDGEDGEDGQDGADGKDGQDGAEGPQGPAGVDGKDGVDGKDGADGKDGAT
GPAGPAGPPGDSGVSPAQMQVITSAIDANTQAIANVQGSIGAINNSVGNVADIQVLQDPN
AAEAIGSALAFGPPSTDAAPFTTASGVARPFAAVVVSGPTIVDGINLNTQLITQNSADIQ
INRTAITQNAVEILNNRQRVESLSQQIDQMGAVLAANTKAIEELNGGLAAVVALPNVSLG
KDESFALSGGFSLYGEKVGFGGAIAIRADENWSVGLTVGHGGSKTTGAVRFRFAR
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgacccgggtttttccagccaccctttcgggcgataccgacgaccttttctccacgcta
gtttccaatccgaatcgaacatcaattcagcggggggaaattaaaatgaagatcaacaat
cacgcaacgatagccagcaaggggcgcaagcaattgctcgcaatcctgctccacagttct
tccattgcacttgtcgcactggccagctctgccgtccatagtcaggaagccatggctcag
gtcggtgaaccggggcctccggggcctccgggtccggaaggtcctgttggtccacagggc
ccacagggtccggaaggtgacgccggcgctgacggtgcgcccggccgccccggaccgcct
ggtccacagggtccggaaggtgacgccggcactgacggtgcggacggcggcccaggaccg
actggtccacagggggtacctgggccaaaaggtccagcaggtgagactggtgctcagggg
gtgcctggtccaaaaggtgaccccggtgagactggtgctcagggggtacctgggccaaaa
ggtgaagccggtgagactgggcctcagggggtgcctggtcgaaaaggtgaccccggtgag
actggtgctcagggggtacctggtccaaaaggtccagcaggtgagactggtgctcagggg
gtgcctggtccaaaaggtgaccccggtgagactggtgctcagggggtgcctgggccaaaa
ggtgaagcaggtgaggctgggcctcagggggtgcctggtcgaaaaggtgaccccggtgag
actggtgctcagggggtacctggtccaaaaggtgaagccggtgaggctgggcctcagggg
gtgcctggtcgaaaaggtgaccccggtgagactggtgctcagggggtgcctggtccaaaa
ggtgaagccggtgagactggtgctcaaggggtacctgggccaaaaggtgaagccggtgag
actggtgctcaaggggtacctgggccaaaaggtccagcaggtgagactggtgctcagggg
gtacctgggccaaaaggtgaaaccggtgagactggtgctcagggggtgcctggtccaaaa
ggtccagcaggtgagactggtgctcagggggtgcctggtcgaaaaggtgaccccggtgag
actggtgctcagggggtacctgggccaaaaggtgaaaccggtgagactggtgctcagggg
gtgcctggtccaaaaggtccaacaggtgagactggtgcaactgggcccgttggtgccgat
ggtgccgtcggaccagccggccctgtcggcgcaacgggccccgcaggagccgacggcgcg
accgggcctgctggcgctaccggggctgccggaccaaaaggcgacaccggtgcgaccggg
ccaaccggtttgaccggtaaaccaggcgcagatggtgccgtaggaccagccggccctgtc
ggcgcaacgggccccgcaggagctgacggcgcgaccggccctgtaggcgctaccggcgct
gccggaccaaaaggcgacaccggtgcgaccgggccaaccggtttgaccggtaaaccaggc
gcagatggtgccgtaggaccagccggccctgtcggcgcaacgggccccgcaggagccgac
ggcgcgaccgggcctgctggcgctaccggcgctgccggaccaaaaggcgatactggtgct
cccggagccgatggagcaacgggggcgactggtgcgactggtccggcgggcgcagatggt
gccgtaggaccagccggccctgtcggcgcaacgggtcccgcaggagccgacggcgctacc
gggccagcaggcgctaccggcgctgccggaccaaaaggcgacaccggtgctcctggagcc
gatggtgcgaccggagcaaccggtgcgaccggtccggcgggcgcggatggtgccgtcggg
ccagccggtccggtcggagcaacgggtcccgcaggtcctgccggggccgatggcgctgac
ggtgccgaggggccagcaggcaaagatggttctgacggtgaagatggcgaggacggccaa
gacggcgccgacggcaaagacggtcaggacggtgctgaggggccacagggtcccgctggc
gttgacggcaaagatggcgtcgatggcaaagatggtgccgatggcaaggacggtgcaacc
ggcccggctggccctgctggtcctcccggagacagcggagtttcgccggcgcagatgcaa
gtcattacatcggcaatcgatgcgaacacgcaggccatcgcaaatgtccagggcagcatc
ggcgccataaacaacagcgttggcaatgtcgcggatattcaggttcttcaggacccgaat
gccgctgaggcgattggatcagctttggcattcggtccaccgagcacggatgcggcacca
ttcaccaccgccagtggggtggcccgtccgttcgccgcagtggttgtcagcggcccgacg
attgtggacggcatcaatctcaacacccagctgatcacgcagaatagtgcggacatccag
atcaaccggacggcaatcacccagaacgcggttgagatattgaacaatcggcaacgggtg
gaatcgctgagccagcagattgaccagatgggcgcggttttggccgccaataccaaagcg
atcgaggaactgaatggcggccttgcagcggttgtcgccctgcccaatgtctcgcttggc
aaggacgaaagctttgccctcagcggcggctttagtctttacggagaaaaagtcggtttt
ggcggtgccattgccatacgggctgatgaaaactggagcgtcggccttaccgtaggccat
ggtggcagcaaaacgaccggtgccgtccggttccgtttcgcgagatag

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