Sphingorhabdus sp. YGSMI21: CHN51_03135
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Entry
CHN51_03135 CDS
T05308
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CHN51_03135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_03135
Enzymes [BR:
sphy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CHN51_03135
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CHN51_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Bombinin
Motif
Other DBs
NCBI-ProteinID:
ATW02626
UniProt:
A0A2D3RA81
LinkDB
All DBs
Position
complement(676247..676495)
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AA seq
82 aa
AA seq
DB search
MSETNEDFSALNFEDALKRLEDIVRKLESGDVPLDQSIALYSEGEKLRGLCQQRLEAAQA
KIEKITLDRDGKPQATAPFDAD
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccaatgaagatttttctgccctgaatttcgaggatgcgctgaagcggctc
gaggatattgtccgcaagctcgaaagcggcgatgtgccgctcgaccagtcgattgcgctg
tatagcgaaggcgagaaattgcgtggcctgtgtcagcaacggctggaagccgcgcaggcc
aagatcgagaaaatcaccctcgaccgcgatggcaaaccgcaagctactgcaccttttgac
gcggactga
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