Sphingorhabdus sp. YGSMI21: CHN51_05350
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Entry
CHN51_05350 CDS
T05308
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00907
Pinene, camphor and geraniol degradation
sphy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CHN51_05350
Enzymes [BR:
sphy01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
CHN51_05350
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
GCV_H
HlyD_3
ATP-grasp_3
RnfC_N
Hanta_Gn-H
Motif
Other DBs
NCBI-ProteinID:
ATW03027
UniProt:
A0A2D3RCS6
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Position
complement(1099774..1101768)
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AA seq
664 aa
AA seq
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MTRINTLLVANRGEIACRVMRTAKTQGMRTVAVYSDADADTPHVKMADDAVHIGPAPVNE
SYLQIDKIIQAAKDSGADAIHPGYGFLSENAAFSKACADANIIFVGPPEKAIDVMGDKAR
SKRAMIAAGVPCVPGYQGDDQADDVLVAEANNIGVPLMVKAAAGGGGRGMRLVHDLKDVP
NAIKLARSEAENAFGNGELILEKAIIKPRHVEIQVFADSHGNTIHLGERDCSVQRRHQKV
IEEAPCPVMTPDLREQMGAAAVEAAKAVDYVGAGTVEFLLDQSGSFYFLEMNTRLQVEHP
VTEEVTGLDLVALQLKVAAGDLLGLDQADITLTGHAMEVRLYAEDPADDFLPSTGPVHLW
KPSTLSRVDSGIESGGEVSPFYDSMVAKIITHGATRDEARRRMIKALSETALFGPKTNRD
FLIDALDKPDFVKGEATTAFIAENYGEDGVDLGAHDFSSYAIAAVIHHKLRQQAAHKLAL
NVNPEMLDWSNTGTLETVTQYADGEDAQTIHVHVDKPGHYRVSSGEETATIELISLSADR
AKLRVDGRTVETIYFDDHRTLYLALPKRSLTVTDLTGLSAMEDAGGGGTVVAPMHGLLLE
ILVETGARVAKGDKLAVLEAMKMQHEILAEIDGTVETIAATAGVQIAADDLIMEIVADEE
SGEA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaatcaacactctcctggtcgccaatcgcggcgaaatcgcctgccgggtgatg
cgcaccgccaagacgcagggcatgcgcaccgtcgcggtctattccgacgcggacgctgat
acaccccatgtcaaaatggcggatgacgccgtgcatatcggcccggccccggtgaatgaa
tcctatctgcagatcgacaagattattcaggcggccaaggacagcggcgcggatgcgatc
catccgggctatggtttcctctcggaaaacgccgccttttccaaagcctgcgcggacgca
aatatcatctttgtcggcccgccggaaaaagcaattgatgtgatgggcgacaaggcgcga
tcgaaacgcgcgatgatcgctgccggcgtgccctgcgtgcccggctatcagggcgatgat
caggcggatgatgtgctggtcgccgaggccaacaatattggcgtgcccttgatggtcaag
gcggccgctggcggcggcggtcgcggcatgcggctggtccatgatctgaaagacgtgccc
aatgcgatcaagctggctcggtccgaagcggagaatgccttcggcaatggcgagctgatt
ctcgagaaagcgatcatcaagccacgccatgtcgagatccaggtctttgccgacagccac
ggcaacaccatccatctcggcgagcgcgactgttcggtccagcgccgccatcagaaagtg
atcgaggaagcgccatgccccgtcatgacgccagacttgcgcgaacaaatgggcgcggcg
gctgtcgaagccgccaaggccgtcgattatgtcggcgccggcacagtggaatttctgctc
gaccagtcgggcagcttctattttctcgaaatgaacacgcggctgcaggtcgaacatccg
gtgaccgaggaagtgaccggtctcgatctggtggcgctgcagctcaaagtcgcggcgggc
gatttgctggggctagaccaagcggacatcacgctcaccggccatgccatggaagtgcgg
ctctatgccgaggacccggcggatgatttcctgcccagcaccggcccggtccatctgtgg
aaaccctccaccctgtcgcgggtcgacagcggtatcgaaagcggcggcgaggtttcgccc
ttttatgattcgatggttgccaagatcatcacccatggtgccacccgcgacgaagcccgt
cgccggatgatcaaggcgctgtcggaaaccgccctgttcggtcccaagaccaaccgcgat
ttcctgatcgatgcgctggacaaaccggacttcgtgaagggcgaggccacgaccgccttt
atcgccgaaaattatggcgaagacggagtcgatctcggcgcgcatgatttttcgtcttat
gcgatcgctgcggtcatccatcacaagctgaggcagcaggcggcgcacaagctcgcgctc
aacgtcaatccggaaatgctcgactggtcgaacaccggcacgctggaaacggtcacccaa
tatgccgatggcgaggatgcccagaccatccatgtccatgtcgacaagccgggtcactat
cgggtcagctccggtgaggaaacggccacgatcgagctgatcagcctgtccgcagaccga
gcgaaattgcgagtcgacggccgtacggtcgagacgatctattttgacgaccatcgcacc
ctctatctggcgctgcccaagcggtcattgaccgtgaccgacctgaccggactgagcgcc
atggaagatgccggcggcggcggcaccgtggtcgcaccgatgcatgggcttttgctcgag
atattggtcgaaaccggtgcgcgggtggccaagggcgacaagctcgctgtgctcgaggcg
atgaagatgcagcacgagattctcgcggagattgacggcacggttgaaactattgcggcg
acggcgggcgtgcagattgccgccgatgatctgatcatggaaattgtcgcggatgaagaa
agcggcgaggcatga
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