Sphingorhabdus sp. YGSMI21: CHN51_16525
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Entry
CHN51_16525 CDS
T05308
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHN51_16525
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphy01007
]
CHN51_16525
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphy03016
]
CHN51_16525
03029 Mitochondrial biogenesis [BR:
sphy03029
]
CHN51_16525
Enzymes [BR:
sphy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
CHN51_16525
Amino acid related enzymes [BR:
sphy01007
]
Aminoacyl-tRNA synthetase
Class I (A)
CHN51_16525
Transfer RNA biogenesis [BR:
sphy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHN51_16525
Prokaryotic type
CHN51_16525
Mitochondrial biogenesis [BR:
sphy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHN51_16525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
Motif
Other DBs
NCBI-ProteinID:
ATW04954
UniProt:
A0A2D3RGV0
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All DBs
Position
3446805..3448034
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AA seq
409 aa
AA seq
DB search
MTHYQSDLLRLLNDRGYIHQLTDAEALDSLATKSIIPGYIGFDVTADSLHVGNLVQIMLL
RRLQQAGHKPIVLMGGGTTKVGDPSGKDEMRKLLDDDGIASNFAKIRTSFENFLTFGDGP
TDAIMVNNNDWLGELEYIPFLRDIGRHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ
AYDFLELSRQHGCQLQLGGSDQWGNIVNGIELGRRVDGAELFGVTTPLITKADGSKMGKS
VDGAIWLNAERLSPYDYWQFWRNTDDRDVGKFMRLFTDIDLEEIARLETLQGSEINEAKK
ILADAATAMAHGDSAAADAAKTAQQTFEQGTAGDDLPVFEVTGGEISILDALVGIGFCAS
KGEAKRLVAGGGARIDDEPVRDAGSMVAVTGEDRKISAGKKKHGLLRRA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgacccattatcaatccgatctgctgcgtctactgaatgatcgcggctatatccaccag
ttaaccgatgccgaggcattggattcacttgccaccaagagcatcattcccggctatatc
ggatttgatgttaccgcagattcgctgcacgtcggcaatctggtgcaaatcatgcttctc
cgccggctgcagcaggcaggccacaaaccgatcgtcctgatgggcggcggcaccaccaag
gtgggcgatccttccggcaaggatgagatgcgaaaattgctggatgatgacgggattgcg
tcaaattttgccaaaatccggaccagtttcgagaattttttgacatttggtgacggtcct
accgatgctatcatggtcaacaataatgactggctgggcgagttggaatatatcccgttc
ctgcgcgatatcggccggcacttcacgatcaaccggatgctgacctttgattccgtcaaa
ctgcggctggagcgggaacagccgctgacctttctcgaattcaactatatgatcctgcag
gcttacgactttcttgaattgtcgcggcagcatggttgccaattgcagcttggcgggtcc
gatcaatggggcaatatcgtcaacgggatcgagcttggtcgacgggtagacggcgccgaa
ctgttcggagtcaccacccctctgatcaccaaagcagacgggtccaaaatgggcaaatcc
gtcgacggtgcgatctggctgaacgccgaacgcctgtcgccctatgactactggcagttc
tggcgcaacacagatgatcgcgatgtcggcaagttcatgcgattgttcaccgacatcgat
ctggaagaaattgcgagactggaaacgcttcaagggtcggaaatcaacgaagccaagaaa
atactggccgatgccgccaccgcgatggcacacggggacagcgccgcagcggatgccgcc
aagaccgcgcagcagaccttcgaacaaggcaccgcgggcgacgatttgcctgttttcgaa
gtgacgggcggcgagatttcaattctcgacgctcttgtcggtatcggcttttgcgcttcg
aagggcgaagccaagcgactggttgccggcggtggcgcccggatcgacgacgagccggtt
cgggatgcgggatcgatggttgctgtgacaggtgaagacaggaaaatttctgccggcaag
aaaaagcacgggttgcttcgccgagcctga
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