Stylophora pistillata (Smooth Cauliflower Coral): 111341692
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Entry
111341692 CDS
T05774
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111341692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spis03400
]
111341692
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111341692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ArdA
Mating_N
AAA_27
IL34
ORF6C
Motif
Other DBs
NCBI-GeneID:
111341692
NCBI-ProteinID:
XP_022804408
EnsemblRapid:
LOC111341692
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MAVQPCQQFSLDGAAEQGFLAFYRSLPEKPETTFRVFDRSDYYTVHGADAAFAAKEVFKT
TSVIKYLGIGEKKVPSVILSKMNFESTVRDLLLVRQYRVEMYRAIKGAKNTSAWELVAKA
SPGNLQQFEDILFGSNDMSVSAVVMAIKLGMENGQRVVGASYADAAARKLGVCEFVDNDQ
FSNLEALLVQLGPKECLLPQNDTSADAAKVLEVIQRSNILITDRKKSEFSNKDIVQDLNR
LLKLGASGNSGTLAEIDLTHATSALAALIKYLELLADESNFSQFYLSTFDLTQFMKLDAA
AVRALNLLPNPLDGGNKSMCLVGLLNKAKTAQGQRLIAQWIKQPLMDKNKIEERLNIVEV
FFEDTELRQTIQEELRKIPDFSRLAKKFQRQKASLQDCVRVYQALHRLPTFTGILTGYQG
SHHELISDCFTMPIKDLIDDFQKFIELVETTVDLDQVENHEYLIKASFDEGLQECREKMD
EILEQIPVELNKAARDLGLEAGKSIKLETNNQYGYFFRITKKEEKALRNNKRFTTIDTRK
DGIRFNNSALRQLNEQFQAFKETYNEVQSKLANEVIKVAGGYSEPMQMLSDIIAQLDALI
SFAHVSANAPIPFIRPNITSKGEGHIKLDMARHPCLEVQDDVAFISNDLKLERGDKEFLI
ITGPNMGGKSTYIRQTGVIVLMAQLGCFVPCSSAEISITDCILARVGSGDSQLKGVSTFM
SEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISHYIATNIKCFCLFATHFHE
LTALADEVSTVTNLHVTAMTSSGTLTLLYKVKPGVCDQSFGIHVAELAHFPTSVIEVSIH
SDTGASPAKRRRMVKQDGEEIIKDFLSRVAKLPVESMTEEQTTKEVARLKEQVLARNNPY
IQELLAK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacagccatgccagcagttttcgctagacggagcggcagaacagggatttctt
gcattctatcgttcattgcccgagaaacctgaaacaactttccgtgtgttcgatcgttcg
gactactatactgttcatggtgctgatgcagcatttgctgccaaagaagtcttcaagaca
acaagtgttattaaatatcttgggattggtgaaaagaaggttccatcagttattttgagt
aaaatgaattttgagagcacagttcgggatctgttgcttgtacgtcagtacagagtggaa
atgtacagagcaatcaaaggtgcaaagaatacttcagcctgggaacttgttgccaaggca
tcacctggtaatttacaacaatttgaagacattctctttggaagcaatgacatgtctgta
tcagcagttgtcatggcaatcaagcttggtatggagaatggccaaagggtggtaggtgct
tcatatgctgatgctgcggcaaggaagctcggagtctgtgaatttgtagataatgatcaa
ttttctaatctggaggctttgcttgtgcagcttggaccaaaggaatgtttactgccacaa
aatgatacaagtgctgatgcagccaaagtattggaggtgattcaacgaagcaacattctc
ataactgacaggaagaaatctgagttttccaacaaagacatagtacaggatctcaacagg
cttttgaagttaggagctagtggaaatagtggaactttggcagaaatagacttgacacat
gcgacatctgctctagctgctttgatcaagtacttagagcttcttgcagatgagtcaaac
ttcagccagttttatctgagtacatttgatctaacacagttcatgaagcttgatgcagca
gctgtgagagctctcaatcttcttccaaacccattagatggaggcaataaaagtatgtgt
cttgttggtttgttgaataaggccaagacagcacagggacagagattaatagcccagtgg
atcaaacaacctttgatggataaaaacaaaatagaagagagactcaatattgttgaagtt
ttctttgaagacacagaacttagacaaaccattcaggaagagttgcgaaaaattccagat
ttttcaagactagccaagaaattccagcgacagaaagcaagtttacaggactgtgtgagg
gtctaccaagctcttcacagacttcctactttcactggtattcttactggctatcaggga
agccaccatgaacttataagcgactgctttacaatgcccataaaggatcttatagatgat
tttcaaaagttcatcgagttagtggagaccactgtagatctcgatcaggtggagaaccat
gagtatttgatcaaagcttcttttgatgaaggattgcaagagtgtagagaaaagatggat
gaaattttagagcagataccagtagaactaaacaaggcagcacgagatcttggtcttgag
gcaggaaaatcaataaaactggaaaccaataaccagtatggttatttctttaggataact
aaaaaggaagaaaaggccctgagaaacaacaagcgctttacaacgatagacacaagaaaa
gatggaataagattcaataattcagcactacggcaactcaatgagcagtttcaagctttt
aaggagacttacaatgaagtgcagagtaaacttgctaatgaagtgataaaagtggctgga
ggatacagtgagccaatgcaaatgctaagtgacatcattgctcagcttgatgccttgatt
agttttgcacatgtctcagctaatgctcctattccattcatccgtccaaatattacttca
aaaggagagggtcacatcaaacttgacatggcaagacatccctgtcttgaagttcaagac
gatgtggctttcatttccaatgatctcaagcttgaaagaggtgacaaagaatttttgata
ataactggccctaatatggggggtaaatctacttacatcagacagactggagtgattgta
ttaatggcccagcttggctgttttgtgccatgtagctcagcagaaatttccatcacagac
tgtattttagcccgagtgggttctggagacagtcagctgaaaggagtttctacatttatg
tctgaaatgctggaaactgcctccatattgaggtctgctactgaaaactctctcatcatt
atcgatgaactaggaaggggaacgtcaacatacgacggctttggactggcttgggcaata
tcacactacattgccaccaacatcaagtgcttctgtctttttgccactcatttccatgag
cttacagctcttgcagatgaagtttccactgtaaccaacctccacgtcactgccatgacc
tccagtgggactctaacgcttttgtataaagttaaacccggtgtgtgtgatcaaagcttc
ggtattcatgtcgcagagcttgcccactttccaacaagcgtcatagaggtaagcatacac
tctgacacgggtgcatcgccagccaaaagacggcgcatggtgaagcaggacggcgaagaa
attatcaaagatttccttagtcgagttgccaagttgccagttgagtcaatgacagaagag
caaacaacaaaggaggtggcaagattaaaggagcaagtactggccagaaataatccttac
attcaagaactcttggccaaatga
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