KEGG   Spiribacter sp. 2438: GJ672_00450
Entry
GJ672_00450       CDS       T06294                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
spiz  Spiribacter sp. 2438
Pathway
spiz00010  Glycolysis / Gluconeogenesis
spiz00020  Citrate cycle (TCA cycle)
spiz00260  Glycine, serine and threonine metabolism
spiz00280  Valine, leucine and isoleucine degradation
spiz00310  Lysine degradation
spiz00380  Tryptophan metabolism
spiz00620  Pyruvate metabolism
spiz00630  Glyoxylate and dicarboxylate metabolism
spiz00640  Propanoate metabolism
spiz00785  Lipoic acid metabolism
spiz01100  Metabolic pathways
spiz01110  Biosynthesis of secondary metabolites
spiz01120  Microbial metabolism in diverse environments
spiz01200  Carbon metabolism
spiz01210  2-Oxocarboxylic acid metabolism
spiz01240  Biosynthesis of cofactors
Module
spiz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
spiz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spiz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:spiz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GJ672_00450 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GJ672_00450 (lpdA)
   00620 Pyruvate metabolism
    GJ672_00450 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GJ672_00450 (lpdA)
   00640 Propanoate metabolism
    GJ672_00450 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GJ672_00450 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GJ672_00450 (lpdA)
   00310 Lysine degradation
    GJ672_00450 (lpdA)
   00380 Tryptophan metabolism
    GJ672_00450 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GJ672_00450 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spiz04147]
    GJ672_00450 (lpdA)
Enzymes [BR:spiz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GJ672_00450 (lpdA)
Exosome [BR:spiz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GJ672_00450 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 HI0933_like GIDA DAO Pyr_redox_3 AlaDh_PNT_C 3HCDH_N FAD_oxidored NAD_binding_8 FAD_binding_3 Thi4 2-Hacid_dh_C UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: QGM20896
UniProt: A0A6B8JQA7
LinkDB
Position
96061..97482
AA seq 473 aa
MTDTYDVVVIGAGPAGYVGAIRCAQLGMSVAVIDEFIRKDGQPSLGGTCLNVGCIPSKAL
LDSSEHYHRVQSELAGHGIRVEGTSLDVPQMIKRKDKVVSDLTGGIKQLFKANQIEWLQG
HGKLLAERQVEFTPHKGKARTLSAGHVLLATGSRPIEIGAAPLDGDRIVDSAGAQEFSEV
PKRLGVIGAGVIGLEMGSVWNRCGSKVVLLEAQDTFLSAVDQQVAREARKLFEKQGLEIK
LGCRVTDTRKGKTISVHYEDSDGKSNLQVDKLVVSVGRRPYTDGLASEDADLLTDERGFV
HVDDYCETNIPGVYAVGDVVRGPMLAHKGSEEGVMVAERIAGHAGHVNYETIPWVIYTDP
EIAWVGRTEGQLKAAGIPHRSGTFGFAATGRARAMDRADGMVKILAHAETDRILGVHMVG
PQASELIAEATLAMEYEASAEDLARTIHAHPTLSEAVHEAALSVHKRAIHKAN
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgacggacacatacgacgtcgttgttatcggggccggtcccgccggctacgttggcgcc
attcgctgcgcgcagctgggcatgagcgtggcggtcattgacgaattcatccgcaaggat
ggccagccctcactgggcggcacctgcctgaacgtggggtgtattccctccaaggcgctg
ctggactcctcggagcactatcaccgggtgcagtcggagctggcgggtcacggtattcgg
gttgagggcacctccctggatgtgccgcagatgatcaagcgcaaggacaaagtggtgtcc
gacctcaccggcggcatcaaacagctgttcaaggccaaccagatcgagtggctgcagggg
cacggcaaactgctggcggagcggcaggtggagttcaccccgcacaagggcaaggcccgc
accctgagcgccggccatgtgctgctggccaccggctcacggcccatcgagatcggcgcg
gcgccgctggacggggaccgcatcgtcgattccgccggcgcccaggaattcagtgaggtg
cccaagcgactgggcgtcatcggtgccggtgtgatcggcctggaaatgggcagtgtctgg
aaccgctgcggctccaaggtcgtcctgcttgaggcccaggacaccttcctgtcggcggtg
gatcagcaggtggcccgggaagcgcgcaagcttttcgaaaaacagggcctggagatcaag
ctgggctgccgggtcaccgacacccgcaagggcaaaaccatcagcgttcactacgaggac
agcgacggcaagagcaatctgcaggtggacaaactggtggtgtcagtggggcgtcggcct
tacaccgacgggctggcgtccgaggatgcggatctgctcaccgatgagcgcggtttcgtg
catgtggacgactactgcgagaccaatatccccggcgtctatgccgtgggcgacgtggtg
cggggcccgatgctggcccacaagggctcggaagaaggtgtcatggtggccgagcggatt
gccggccatgccggccatgtcaactacgaaaccattccctgggtgatttacacggatccg
gagattgcctgggtgggtcgcaccgaggggcagctcaaggccgcggggattccgcatcgc
agcggcaccttcggattcgcggccaccggtcgggcccgagccatggaccgggcggatggc
atggtcaagattctggcccatgccgagaccgaccggatcctgggcgtgcacatggtcggt
ccccaggccagcgagctgatcgccgaagccacattggccatggagtacgaggccagtgcc
gaggatctggcccgcaccattcacgctcacccaaccttgtcggaggcggtgcacgaagcc
gccctgtccgttcacaagcgagccattcacaaagccaactaa

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