Sphingomonas sp. KC8: KC8_05440
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Entry
KC8_05440 CDS
T04987
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_05440
Enzymes [BR:
spkc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KC8_05440
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KC8_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF2800
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARS26730
UniProt:
A0A1X9YD76
LinkDB
All DBs
Position
complement(1133945..1137343)
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AA seq
1132 aa
AA seq
DB search
MANRLKPFSELRGEQRIASDPRELVWLSASAGTGKTHVLSARVLRLLLSGVRPESILCLT
FTKAGAAEMAERVHARLAWWVRLEENALKKELFALGADSDVGAIGRARALFAAVLDAPGG
GLRIQTIHAFCQTLLAGFPDEAGLAPGFRPLEGREEAALARRTLGDLLERAERGGEMGLI
RDIQALSRRLGEKEAEGYLLSCARAPEAMEALGPGIAAKVRTALDVPLGDIDAVIEQKCA
DDAFDVNTVLAISLANGRWGTKKGLERADIAARWLAASPRQRAETLGDLHEIWAKDEGRA
IRSFAKGQAPQEDDYAALASKAFDITSALTGLRLRAALADLLAAGLRAGQAYARAYTDAK
RVAGVVDFDDLIRAAVRLLQSDGMGDWVRYKLDQAIDHILVDEAQDTNARQWAIVAALAG
EFFAGDGARHPAHRTIFTVGDFKQAIFGFQGTDPAAFLAAAHIFGVRARGADREFLQLSL
DRSFRSTAPVLDVVDRLIADLGHDAMGLAEAPPRHVSAREGRLGSVTLWPPIAAGSADEA
DAEEGWIDDATRAFAGRLAQQVRAWMDDPFWVDGRGRPFRPEDLLILVRKRGELAALIVA
RLHAEGVPVAGVDRLRLTAPLAVRDLLAAVRFVLQPDDDLNLAGLLVSPLIGLSQDDLYA
IGFGRKGSLWRALREHQGFDAARDVLADLLATADLTTPYRFLEAMLSGPLDGRRRLLARL
GQEAGDPIDELLNAALQFESDSTPSLQRFIDWFDRGDVEIKRDPSAPLDAVRVMTVHGSK
GLQAPVVILADATGDPSASPVRGLDWEIEDGVSVPVFRPRKAELAGGGLVDDIDRARRRD
LEEHWRLLYVAATRAEERLVIGGALGPKAKGVPPEASWYRAIKGAMEALGAVAEDDPPWG
ATLHHRGGTARGGHERPARAAIPFAEPLWLRAPAPKEARPPRPLAPSSLGVDAVADPPPT
PAMQDAARRGTLLHALFERLPAVAADRREVTALAWLEHGAGVADPALRQSLVADACAIIA
DPALADIFGGDALVEAPIAAVVGGDVVSGTVDRLLVRDDAVRIVDFKTGRRVPASADSVP
DHHLRQMAAYAAALAVVFPGRRVEAALLYTAGPKLMVLSSELLRLHKPGLAG
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcgcctgaaaccgttcagcgaattgcgcggcgaacagcgcatcgcatctgat
ccgcgtgaacttgtctggctgtcggcgtccgccggcacgggcaagacccatgtgctgagc
gcgcgggtgctgcgccttctgctgagcggggtgcgcccggaatcgatcctgtgcctgacc
ttcaccaaggcaggcgccgccgaaatggccgagcgcgtgcatgcgcggctggcctggtgg
gtgcggctggaagaaaatgcgctgaagaaggaattgttcgcgctgggcgcggacagcgat
gttggcgcgattggccgcgcaagggcgttgttcgccgccgtgctcgatgcgccgggcggt
gggctgcgcatccagacgatccatgctttctgccagaccttgctagcgggctttcccgat
gaagcggggctggcccccggttttcggccgctggaagggcgcgaggaagcggcgcttgcc
cgccgcaccttgggcgatctgctcgaacgggccgagcgcggcggggaaatggggttgatc
cgcgacattcaggcgctgagccggcggctgggcgagaaggaagcggagggctatctgctg
tcctgcgcgcgtgcgcccgaagcgatggaagcgctggggccgggtattgccgccaaggtg
cgcaccgcgctggatgtgccgctgggcgatatcgatgcggtgatcgagcagaaatgcgcc
gacgatgcgtttgatgtgaacaccgtcctcgctatctcgcttgctaacgggcgttggggc
accaagaaggggttggagcgtgcggacatagctgcgcgctggcttgccgcttccccccgg
cagcgggctgaaacgcttggtgatcttcacgagatatgggcgaaggacgaaggacgggcg
atccgttcgtttgccaaagggcaggctccgcaggaggatgattatgcggcgcttgcaagc
aaggcgtttgacatcacctcggcgctgacgggcttgcggctgcgcgcggcgctggcggac
ctgctggcggcgggcctgcgcgcggggcaggcctatgcgcgggcttataccgatgccaag
cgcgtggccggcgtggttgatttcgacgatttgatccgggcggcggtgcgattgctccag
tccgacgggatgggcgattgggtgcgttacaagctcgatcaggcgatcgatcatattctg
gtcgatgaagcgcaggataccaatgcgcggcaatgggcgatcgtggcggcgctggcgggc
gagtttttcgcgggcgatggcgcgcggcatccggcgcaccgcacgatcttcaccgtcggc
gatttcaagcaggcgatcttcggatttcaggggaccgatccggcggcgttcctggcggcg
gcgcatatctttggcgtgcgggcacgcggggcggaccgggagtttctgcaattgtcgctg
gatcggtcattccggtcgacggcgccggtgctggatgtggtcgatcgcctgatcgcggac
cttggccatgatgcgatggggctggccgaagcgccgccgcgccatgtgagcgcgcgcgaa
gggcggcttggttcggtgaccttgtggccgccgatcgcggcgggatcggccgacgaagcg
gatgcggaagaaggctggatcgacgatgccacccgcgcctttgccgggcggctggcgcag
caggtgcgcgcgtggatggacgatccgttctgggtggatgggcgtggccgcccgttccgg
ccggaagatttgctgatcttggtgcgcaagcgcggcgaactggcggcgctgatcgtagcg
cggctccatgccgaaggggtgccggtggccggggtcgatcggctgcggctgacggcgccg
ctggcggtgcgcgatctgctggcggcggtgcgcttcgtgcttcagcccgacgatgatctg
aaccttgcggggttgctggtttcgccgctgattgggctgtcgcaggatgatctgtatgcg
atcggctttggccggaagggtagtttgtggcgggcgctgcgtgagcatcaggggtttgat
gcggcgcgggatgtgctggccgatctgctggcgaccgccgatttgacgacgccctatcgc
tttctggaagcgatgctgtccggcccgctcgatggccgtcgccggctgctggcgcggctg
gggcaggaagcgggcgatccgatcgatgaactgctgaacgccgcgctccagtttgaaagc
gacagcacgccttcgttgcagcggttcatcgactggttcgatcgcggcgatgtggagatc
aagcgcgatccgtccgccccgctggatgcggtgcgggtgatgaccgtgcatggatcaaag
ggcttgcaggcgccggtggtgatcctggcggatgcgaccggcgatccatcggcgtcgccg
gtgcgtgggctggactgggaaatcgaagacggcgtttcggtgcccgtgttccgcccgcgc
aaggccgaactggcgggcggcgggctggtcgacgatatcgatcgcgcgcgccgccgtgat
ctcgaagagcattggcggctgctgtacgtcgcggcgacgcgggccgaggaacggctggtg
atcggcggggcgctcggccccaaggccaagggcgtgccacccgaagcgagctggtatcgc
gcgatcaagggcgcgatggaggcgctgggcgcggtcgcggaggatgatccgccgtggggc
gcgacgctgcaccatcgcggtggcaccgcgcgcggcggccacgaacggccggcgcgtgcg
gcgatcccctttgccgaaccactgtggctgcgcgcgccggcgcctaaggaagcgcgcccg
ccacgaccgctggcgccatcgtcgctgggcgtggatgcggtggccgatccgccgccgacc
ccggcgatgcaggatgcggcccggcggggcacgttgctgcatgcgctgttcgaacggctg
ccggcggtggcggcggaccggcgtgaggtaacggcgctggcctggctggaacatggcgcg
ggggtggccgatccggcgttgcgccaatcgctggtcgccgatgcctgcgcgatcattgcc
gatcctgccttggccgatattttcggcggcgatgcgctggtcgaagcgccgatcgcggcg
gttgtcggcggcgatgtcgtgtcgggcacggtcgatcgcctgctggtgcgcgacgatgcc
gtgcggatcgtggatttcaagaccggccggcgggtgcccgccagcgccgattcggtgccg
gatcatcatttgcggcagatggcggcctatgccgcggcgcttgccgtggtatttcccggc
cggcgcgtggaggccgcgttgctctatacggcggggccgaaactgatggtcctgtcatcg
gaattgctgcgcctgcacaagccaggcttggccggctag
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