Shewanella pealeana: Spea_0738
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Entry
Spea_0738 CDS
T00606
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spl03009
]
Spea_0738
03016 Transfer RNA biogenesis [BR:
spl03016
]
Spea_0738
Enzymes [BR:
spl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Spea_0738
5.4.99.29 23S rRNA pseudouridine746 synthase
Spea_0738
Ribosome biogenesis [BR:
spl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spea_0738
Transfer RNA biogenesis [BR:
spl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Spea_0738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABV86065
UniProt:
A8H0H8
LinkDB
All DBs
Position
complement(916411..917088)
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AA seq
225 aa
AA seq
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MTDFVYSPPTTPWLEVLHQDKDIMVVNKPSGLLSVPGRDPAHADSTYTRVLAEFPHAKIV
HRLDMATSGVIVVALLRSAESELKRQFRDRETQKTYYARVAGHVKQSHGTINLPLICDWP
NRPKQKVDHKIGKPSQTHYEVISYGKRSTLVKLTPITGRSHQLRVHMMALGHPILGDNFY
ADPLAKRLAPRLLLHAQSLTITHPYTKEPMTFSCDAPFMNAEGEQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttcgtctactctcctccgacaaccccttggcttgaagtgttacatcaagac
aaagacattatggtcgttaataaaccatcgggtctgttatctgttccgggaagagatcct
gcccacgccgacagtacttacactcgagtattggctgaatttccacatgctaaaatcgtt
caccgattagatatggcgacttcaggcgtcatcgttgtggcgttactgcgtagcgcagag
tcggagcttaagcgtcagttcagagatagagaaacccagaagacctactatgctagggtc
gcgggccatgtcaaacagagccacggcaccattaacctaccgttaatttgtgactggcca
aatcgcccaaagcagaaggtggatcataagataggtaagccttcacagactcattatgaa
gtgattagctatggcaagcgctcaaccttagtaaagctaacgccgatcacaggccgctct
catcagctgcgcgtacatatgatggcactaggccacccaattttgggtgataacttctac
gcagatcctctggccaagcgactcgctccgcgactactgctgcacgcacaatcactgacg
attacccatccatacactaaagagccaatgacctttagctgtgatgcgccctttatgaat
gccgagggtgagcaataa
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