Shewanella pealeana: Spea_1525
Help
Entry
Spea_1525 CDS
T00606
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
spl
Shewanella pealeana
Pathway
spl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spea_1525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_1525
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spea_1525
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Spea_1525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ABV86850
UniProt:
A8H2R3
LinkDB
All DBs
Position
1853244..1853843
Genome browser
AA seq
199 aa
AA seq
DB search
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSEVGHCQSC
RTFTEETYCPICVSTKRGHSEVICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGP
DELGLDLLEQHLATGDVSELILATNPTVEGDATAHYIADMAKRHQLTVSRIAHGVPVGGE
LEYVDSTTLALSFNGRLPM
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtccactcgtagatgagctgatccagtcacttcgttgtttaccaggcgtt
ggcccaaaatctgcccaaagaatggcgtttcaactgctagagcgtgatcgtaaagcgggc
gctaagttggctgattcgctagctaaagctatgtctgaggtgggtcactgtcagtcatgc
cgtaccttcaccgaagaaacctattgcccgatttgtgtcagcactaagcgtggccactca
gaagtgatctgtgtggttgaaacccccgccgatgtattagcaatcgaagcgggtggccat
ttttctgggcgttacttcgtgttgttaggacacctgtcaccgcttgatggtgtggggcct
gatgagcttggacttgatttacttgagcagcatttagcgactggtgatgtcagtgagctt
attttagcaaccaatccaaccgtagaaggtgacgcgactgcgcactacattgccgatatg
gcaaaacgccatcaattgactgtcagtcgtattgcccacggcgtccccgttggtggcgag
ctagagtacgttgatagcacaacacttgcgctttcttttaacggccgtttacctatgtaa
DBGET
integrated database retrieval system
