Shewanella pealeana: Spea_2715
Entry
Spea_2715 CDS
T00606
Definition
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
spl
Shewanella pealeana
Pathway
spl00250
Alanine, aspartate and glutamate metabolism
spl00410
beta-Alanine metabolism
spl00430
Taurine and hypotaurine metabolism
spl00650
Butanoate metabolism
spl01100
Metabolic pathways
spl01110
Biosynthesis of secondary metabolites
spl01120
Microbial metabolism in diverse environments
spl02024
Quorum sensing
Module
spl_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Spea_2715
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Spea_2715
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Spea_2715
00430 Taurine and hypotaurine metabolism
Spea_2715
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spea_2715
Enzymes [BR:
spl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Spea_2715
SSDB
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
P53_tetramer
Other DBs
NCBI-ProteinID:
ABV88035
UniProt:
A8H648
LinkDB
Position
3318677..3320323
AA seq
548 aa
MTARKATASEEALLRIFTVPEAPDSTLSVIEQNISQNLMGFLQESVVAVEKPLSEVELDF
QQYHIPAAPQFVSDYADNMMQTLVAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGLNQN
LVKIETSKAFTPLERQVLGMMHHLIYNQDETFYQSWMHSANVSLGAFCSGGTVANITALW
TARNQLLKADGDFKGIAKQGLLKGLRHYGYDDLAILVSERGHYSLAKTADLLGIGRENII
QVPTSDDNKVDVVKMREIAEQLDKDNIKVMAIVGVAGTTETGNIDPLNALADLAAELNCH
FHVDAAWGGASLLSNKYRHLLAGIERADSVTIDAHKQMYVPMGAGMVIFKDPTFANAIKH
HAEYILRQGSKDLGSQTLEGSRPGMAMLVHACLKVIGREGYEILINNSLEKARYFADLIT
AEADFELVSKPELCLLTYRYVPQSVQIAMAKAREIGDTATLAQFNGLLDGLTKFVQKTQR
EQGTSFVSRTRINPESHQLMDLKAVVFRVVLANPLTSHDILQQVLAEQAQIAKSETHFLP
QLLTLAQS
NT seq
1647 nt
+upstream
nt +downstream
nt
atgacagcaagaaaagccaccgcatcagaagaggcgttactgcgaatttttacggttcca
gaagccccagactctaccctcagtgtgattgagcaaaacatctcgcaaaacctaatgggt
ttcttgcaagaaagcgtggtggctgtcgagaaaccgctttctgaagttgaactggacttt
caacagtaccatattcctgctgcgccgcagtttgtgtctgattatgccgataatatgatg
caaacattagtagcccactcagtgcacacctctgcgcccagttttatcggtcatatgacc
tcggctctaccttactttgtattacctctgtctaagatgatggtcgggcttaatcaaaac
ttagtaaaaatagagacctctaaagcctttacgccgttagagcgccaagtgctggggatg
atgcatcatcttatttataaccaagatgaaaccttttaccaaagctggatgcacagcgcc
aatgtctctttgggcgcattttgctctggcggcacagtcgctaatatcaccgccttgtgg
acggctcgtaaccaactgcttaaggccgacggtgactttaaaggtatcgccaagcaaggc
ctactcaaaggcctgcgtcactatggttacgatgacttagctatcttggtctctgagcgc
ggtcactattcgcttgctaaaactgcagacttactaggtattggccgagaaaacatcatt
caggtacctacatcggacgataacaaggtcgatgtggttaagatgcgtgaaatagctgag
caacttgataaagacaacattaaagtcatggcgattgttggcgttgctggtaccactgaa
actggcaatattgatccgctaaatgcgcttgccgatctagccgctgagctaaactgtcac
ttccatgtcgacgctgcatggggcggcgccagtctattatcgaataaataccgtcacttg
ttagccgggattgagcgcgccgattcggtcaccatcgatgcccataagcagatgtatgtc
cccatgggcgcaggtatggtgatctttaaagacccaacctttgctaacgccattaaacat
catgccgagtatatcctacgtcaaggctcgaaagacttaggcagtcagaccttagagggc
tctcgcccaggtatggcaatgctagtacatgcttgccttaaggtgataggccgcgaaggt
tatgaaattttgattaataacagcctagagaaggcgcgttattttgcagacttgatcacc
gctgaagccgactttgagctggtgtctaaacctgaactttgtctacttacctaccgttat
gtgccacaatcggtacaaattgccatggctaaagctcgtgaaataggtgatacagcaacg
cttgcacagttcaatggtttgctcgatggtctaactaagtttgtacaaaaaactcagcgc
gagcaaggcacctcgtttgtatcacgaacccgaattaatcctgaaagccaccagctcatg
gatctcaaagccgtggtatttagggtggtattagccaacccactcactagccatgacatt
ttacagcaagtgttagccgagcaagcccaaatagccaagagtgaaactcacttcctacct
cagttgctcactctggcgcagagctaa
DBGET
integrated database retrieval system
