Sphingomonas sp. LK11: AV944_06195
Help
Entry
AV944_06195 CDS
T04954
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
splk03000
]
AV944_06195
Transcription factors [BR:
splk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV944_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APX67490
LinkDB
All DBs
Position
1271349..1272377
Genome browser
AA seq
342 aa
AA seq
DB search
MLPAKRPEGVTIRAVGERAGVSAMTVSNVINGAGRVSPTTRAAVLAAIEALGYVPNVAAR
RLAKARATTLGLLYSDKGTPFIDSVLLGALRASNARGLQFIAQGEEGLTREAAEAALRTL
VQSGAAAVLLLPPFAELLSGSGLFEELGVAAAAIATGQTMPDMATVRIDNRAAMAAMTAH
VVQAGHRRIGFLAGPQHFSVADERLAGFRDGLAASGLDYDRSLVVRAGFDPAAGAAAGRG
LLDRPDRPSAILCSSDDMAAGLIGEASRRGLRLPDELAVTGFDDTAIAARLWPPLTVIRQ
PVGDMAFRAVEQVLAALRSRVVEDQVVDFELVARESVGLAAR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atccttccggccaaacgccccgaaggcgtcaccatccgcgcggtcggcgagcgggcgggg
gtgtcggcgatgaccgtgtccaacgtcatcaacggcgctggccgggtcagcccgacgacg
cgcgcggcggtgctcgcggcgatcgaggcgctgggctatgtccccaatgtcgcggcgcgg
cgactggccaaggcgcgagcgacgacgctggggcttttgtacagcgacaagggtacgccc
tttatcgactcggtgctgctgggcgcgctgcgggcgagcaatgcgcgcggcctgcaattc
atcgcgcaaggtgaggaaggactgacccgcgaagcggcggaggcggcgctgcgcacgctg
gtgcagagtggtgcggcggcggtgctgctcctgcccccctttgcggaattactgagcggg
tcgggactgttcgaggaactgggcgtcgcggcggcggcgatcgcgacggggcagaccatg
cctgacatggcgaccgtccggatcgacaatcgcgcggcgatggcggcgatgaccgcgcat
gtcgtgcaggccgggcatcgccgcatcggctttttggcggggccgcagcatttctccgtc
gccgacgagcggctggcggggtttcgcgacgggctggcggcgagcggactggattacgac
cggtcgctggtcgtgcgcgccgggttcgatccggcggcgggcgcggcggcgggtcggggg
ctgctcgaccggcccgaccgaccgagcgcgatcctgtgcagcagcgacgacatggcggct
gggctgatcggcgaggcgtcgcgccggggcctgcgcctgccggacgaactggccgtcacc
gggttcgacgataccgcgatcgcggcgcggctctggccgccgctgaccgtgatccgccag
ccggtcggcgacatggccttccgcgcggtcgagcaggtactggcggcgctacgctcgcgg
gtggtggaggaccaggtggtggatttcgaactggtggcgcgggagtcggtggggcttgcg
gcccgataa
DBGET
integrated database retrieval system