Sphingomonas sp. LK11: AV944_17060
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Entry
AV944_17060 CDS
T04954
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
splk03000
]
AV944_17060
03036 Chromosome and associated proteins [BR:
splk03036
]
AV944_17060
Transcription factors [BR:
splk03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
AV944_17060
Chromosome and associated proteins [BR:
splk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AV944_17060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
MarR
HTH_5
HTH_11
HTH_IclR
HTH_Crp_2
HTH_CodY
HTH_28
HTH_DeoR
HTH_PafC
Rrf2
Motif
Other DBs
NCBI-ProteinID:
APX67799
LinkDB
All DBs
Position
complement(3694837..3695292)
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AA seq
151 aa
AA seq
DB search
MDTKDRQIVRLLQQDGRLTNQELSERVGLSPSPCLRRVRLLEQAGVIQGYGAIVDQQRYG
LPVTAFIRVRLERHARDLVQQFEEAIRQLDEVMDCHLLTGDADYLLRVIVADLEAYERFI
RRKMHAIAGITSLDTTFAYGVVKSSRTFPVD
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaggatcgccaaatcgttcgcctgctccagcaggacggacgcctcaccaac
caggaactgtccgaacgggtcggcctgtcgccgtctccctgtctgcggcgggtgcggctg
ctcgaacaggcgggggtgattcaaggttatggcgcgatcgtcgaccagcagcgctatggc
ctgccggtgaccgcgttcatccgggtgcggctggagcgccatgcccgcgatctggtgcag
cagttcgaggaggcgatccgccagctggacgaggtgatggattgccacctgctgaccggg
gatgcggattatctgcttcgggtcatcgttgccgatctggaggcctatgagcgcttcatc
cgccgcaagatgcacgcaatcgccgggatcaccagcctggataccacctttgcctatggg
gtggtgaagagcagtcggacatttcccgtcgattga
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integrated database retrieval system
