KEGG   Streptomyces pluripotens: LK06_002190Help
Entry
LK06_002190       CDS       T04845                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
splu  Streptomyces pluripotens
Pathway
splu03030  DNA replication
splu03410  Base excision repair
splu03420  Nucleotide excision repair
splu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:splu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LK06_002190
   03410 Base excision repair
    LK06_002190
   03420 Nucleotide excision repair
    LK06_002190
   03430 Mismatch repair
    LK06_002190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:splu03032]
    LK06_002190
   03400 DNA repair and recombination proteins [BR:splu03400]
    LK06_002190
Enzymes [BR:splu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LK06_002190
    6.5.1.6  DNA ligase (ATP or NAD+)
     LK06_002190
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LK06_002190
DNA replication proteins [BR:splu03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    LK06_002190
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     LK06_002190
DNA repair and recombination proteins [BR:splu03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LK06_002190
   NER (nucleotide excision repair)
    Other NER factors
     LK06_002190
   MMR (mismatch exicision repair)
    Other MMR factors
     LK06_002190
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ARP68958
UniProt: A0A221NTP3
LinkDB All DBs
Position
523966..525504
Genome map
AA seq 512 aa AA seqDB search
MLLTRIAQVSREIAAASARSRKTALLAELFREAEPADVPLVIPYLAGRLPQGRLGIGWKV
LNRRVPPAAEPALTVREVDARLTELSQVTGPGSRAEQTRITSELMGAATAAEQHFLFGLL
TGEVRQGALAAAAMEALAQATGADPAGVRRAVMLAGSLQVVAEALLNEGPGALDRFRLTV
GRPVLPMLAHSASSVAEAVAKLGPCAVEEKLDGIRVQVHRDGDTVRVHTRTLDDISARLP
EVRVAALELREERFILDGEVISLDAENRPRSFQETAGRVGSRTDVAKAAAEVPVSPVFFD
TLAIDGDNLLDLPLAERHARLARLVPGPMRVRRTVVSGPEEIPEAERFLADALARGHEGV
MVKALDAPYSAGRRGASWLKVKPVHTLDAVVLAAEWGHGRRTGRLSNLHLGARNLDGTFA
MLGKTFKGMTDSMLTWQTERLRHLAVEDDGQVVRVRPELVVEVAYDGLQRSSRYPAGITL
RFARVLRYREDKRPDEADTVESLLAAHPEVEP
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctgacccggatcgcccaggtgtcccgggagatcgccgccgcctcggcacggtcc
cgcaagaccgcgctgctcgccgaactgttccgggaggcggaaccggccgacgtgccgctc
gtcatcccctatctggccggacggctaccgcagggacggctcggtatcggctggaaggtg
ctcaaccgccgcgtgcctcccgccgcagaacccgctctcaccgtccgcgaggtcgacgcc
cggctcaccgagctgagccaggtgaccgggccgggctcccgggcggagcagacccggatc
accagtgagctaatgggcgcggccaccgcagctgagcagcactttctgttcggcctgctc
accggcgaggtacggcagggtgcgctggccgcggcggccatggaggcactggctcaggcg
accggcgcggacccggccggcgtccggcgcgcggtgatgctcgccggttcgctgcaggtg
gtcgccgaggccctgctgaacgagggacccggggcgctggaccgcttccgactcaccgtg
ggccgcccagtactgccgatgctggcgcacagcgcctcctcggtcgccgaggcggtggcg
aagctcggcccgtgcgcggtggaggagaagttggacggtatccgggtccaggtccaccgg
gacggcgacacggtgcgcgtgcacacccggacactggacgacatcagtgcccggctaccc
gaagtgagagtcgccgcactggagttgcgggaggagcgcttcatcctggacggcgaggtg
atctccctggacgcagaaaaccggccacggtccttccaggaaacggcgggccgggtcggc
tcccgcacggacgtggcgaaggccgccgccgaggtcccggtctccccggtgttcttcgac
accctcgccatcgacggcgacaatctcctggacctccccctggccgaacgacacgcccgg
ctggcccggctggtacccggccccatgcgggtccggcgcacggtggtctcggggccggaa
gagatcccggaggcagaacggttcctcgccgacgcgctggcccgcggccacgagggagtg
atggtgaaggcactggacgcgccctacagcgcgggccgtcggggtgcctcctggctgaag
gtcaagccggtccacacgctcgacgcggtggtactggccgccgagtggggccacggccgc
cgcaccggcaggctttccaacctccacctgggtgcccgcaacctggatggtaccttcgcg
atgctcggcaagaccttcaagggcatgaccgactccatgctcacctggcagaccgagcgg
ctgcggcacctagcagtcgaagacgacggccaggtggtccgggtccgccccgaactcgtc
gtggaggtcgcctacgacgggctgcaacgctcctcccgctatccggcgggtatcaccctg
cgcttcgcccgtgtgctccgctaccgcgaggacaagcgccccgacgaggccgatacggtg
gagtccctgttggcggctcacccggaggtcgaaccgtga

DBGET integrated database retrieval system