KEGG   Serratia plymuthica PRI-2C: Q5A_001950Help
Entry
Q5A_001950        CDS       T04576                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
sply  Serratia plymuthica PRI-2C
Pathway
sply00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:sply00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Q5A_001950 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sply01002]
    Q5A_001950 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sply01011]
    Q5A_001950 (dacB)
Enzymes [BR:sply01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Q5A_001950 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     Q5A_001950 (dacB)
Peptidases and inhibitors [BR:sply01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   Q5A_001950 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:sply01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   Q5A_001950 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Motif
Other DBs
NCBI-ProteinID: ANS40889
UniProt: A0A1B1KKB9
LinkDB All DBs
Position
complement(418761..420194)
Genome map
AA seq 477 aa AA seqDB search
MRFSRIVSALACAFVLNANAAPVEDYTQYLPDGANLALVVQKIGADAPTIDYHSQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGDISDGVLRGNLIARFSGDPTFKRQSLRNMV
AILKKQGVRQITGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGDMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLTQRSD
PLPLAFAIQDGASYAGAILKDELTQAGIQIDGHLKRQTQPGLAGTVIAQTQSAPLHELLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGADAVRQVLRQKAGVDLGNSIVVDGSGLS
RHNLLAPATMMQALQYIAQHDSELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRFAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcaaatgcg
gccccggtggaagattacacacaatatttgcctgatggggccaaccttgccctggtagtt
cagaagatcggcgccgatgcgccgaccatcgattatcattcacagcaaatggcgttaccg
gccagtacccaaaaggtgctgacggcgctggctgccttgttgcagctaggccccgattat
cgtttcaccaccacgctggaaagccagggcgatatcagcgacggcgtactgcggggcaat
ctgatcgcccgcttcagcggcgacccgacctttaaacgccagagcctgcgcaatatggtg
gcgatcctgaaaaaacagggcgtgcgccagattaccggcgacgtgctggtcgacacgtcg
gtattcgccagccacgacaaagcccctggctggccgtggaacgatctgacgcagtgcttc
agcgcaccgccggcagcggcgattgtcgatcgcaactgcttctcggtatcgctgtacagt
gcgccaaacccgggcgacatggcctttatacgcgtggcctcttattacccggtcaatatg
ttcagccaggtgcgaacgctggcgagaggctctgcggacgcccaatactgtgagctggac
gtggtgccgggcgaattgaaccgctttaccctgactggctgtctgacccaacgcagcgat
ccgctgccgctggccttcgccattcaggatggcgccagctatgccggcgctatcttgaaa
gatgaactgacgcaagccggcatccagatagatggccacctgaaacgccagactcagcct
ggcctggccggcacggtgattgcgcaaacgcaatcggcgccgctgcacgagctgctgaag
atcatgttgaagaaatcggacaacatgatcgccgataccgtgtttcgcaccatcggccat
gaacgtttcggcgttccgggcacctggcgcgccggcgcagatgccgtacgtcaggtactg
cgtcagaaggccggggttgatctgggcaacagcatagtggtggacggctctggcctctcc
cgccataacctgctggccccggcgaccatgatgcaggcgttgcagtacattgcgcagcat
gacagcgaactgaactttatttcgatgctgccgctgtccggctacgacggcaccctgcgc
taccgtggcgggctgcacgaagccggcgtcgacggcaaggtttccgccaaaaccggcgca
ctgcagggcgtgtataacctggcgggctttatcaccaccgccagcggccaacgttttgcg
ttcgtacaatacctgtcgggttatgccgtaccaccggaagatcagaaacagcgtcgcgct
ccgctggtgcgtttcgaaagccgcttgtaccgggatatttatcaaaataactga

DBGET integrated database retrieval system