KEGG   Serratia plymuthica PRI-2C: Q5A_003310Help
Entry
Q5A_003310        CDS       T04576                                 

Gene name
ddl_1
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sply  Serratia plymuthica PRI-2C
Pathway
sply00473  D-Alanine metabolism
sply00550  Peptidoglycan biosynthesis
sply01100  Metabolic pathways
sply01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sply00001]
 Metabolism
  Metabolism of other amino acids
   00473 D-Alanine metabolism
    Q5A_003310 (ddl_1)
  Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Q5A_003310 (ddl_1)
 Human Diseases
  Drug resistance
   01502 Vancomycin resistance
    Q5A_003310 (ddl_1)
Enzymes [BR:sply01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Q5A_003310 (ddl_1)
Peptidoglycan biosynthesis and degradation proteins [BR:sply01011]
 Precursor biosynthesis
  Amino acid ligase
   Q5A_003310 (ddl_1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATPgrasp_Ter ATP-grasp_3 ATP-grasp ATPgrasp_ST RimK TTL ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: ANS41155
UniProt: A0A1B1KL36
LinkDB All DBs
Position
714880..715800
Genome map
AA seq 306 aa AA seqDB search
MADKVAVLLGGTSAEREVSLQSGAAVLAGLREAGIDAHGIDIRDFPVTQLKEHGFTKVFI
ALHGRGGEDGTLQGMLEFLELPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRR
QYAGAEKQSLIARVEALGLPLIVKPSREGSSVGMSKVTERTALEAALEEGFRHDDDVLVE
KWLSGPEYTVAMLGDQVLPSIRIQPAGVFYDYQAKYISDDTQYFCPSGLGAEQEAEMAAL
ALRAYRGLDCSGWGRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVAR
ILELAD
NT seq 921 nt NT seq  +upstreamnt  +downstreamnt
atggctgataaagttgccgtactgctgggtggcacctccgctgaacgtgaagtgtcattg
caatcgggcgctgccgtgctggcagggctgcgggaagccggtatcgacgcccatggcatc
gatatccgcgatttcccggtaacccagcttaaagaacatgggtttaccaaagtgtttatc
gcgctgcacgggcgtggtggcgaggatggcaccctgcaggggatgctggaattccttgag
ctgccttataccggcagtggcgtgatggcgtcggcgctgaccatggacaagtggcgcacc
aagatggtgtggcagtcgatggggctgccggtcgcaccttatgtggcgctgaaccgccgg
caatatgccggcgcagagaaacagagcctgattgctcgcgtggaggctctgggcctgccg
ctgatcgtcaagccgagccgcgaaggctccagcgttggcatgagcaaggtgaccgagcgc
actgcccttgaggccgcgctggaagaaggtttccgccatgacgacgacgtgctggtggag
aagtggctgagcggccctgaatacaccgtagccatgctgggtgaccaggtgctgccttcg
atccgcattcagccggccggcgtattttacgactaccaagccaagtacatttcggacgat
acccagtatttctgtccaagtggcctgggcgctgaacaagaggccgaaatggccgcattg
gccttacgtgcctaccgtgggctggactgcagcgggtggggccgcgtggatgtgatgcag
gatagcgatggcagcttctatctgcttgaggtgaacacctcgccgggcatgaccagtcat
agcctggtgccgatggcagcgcgccagtctggtttaagcttctcgcaactggtagcgaga
attttggagttggccgactga

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