Serratia inhibens: Q5A_003310
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Entry
Q5A_003310 CDS
T04576
Symbol
ddl_1
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sply
Serratia inhibens
Pathway
sply00470
D-Amino acid metabolism
sply00550
Peptidoglycan biosynthesis
sply01100
Metabolic pathways
sply01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q5A_003310 (ddl_1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5A_003310 (ddl_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Q5A_003310 (ddl_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Q5A_003310 (ddl_1)
Enzymes [BR:
sply01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Q5A_003310 (ddl_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Precursor biosynthesis
Amino acid ligase
Q5A_003310 (ddl_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
RimK
ATPgrasp_ST
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ANS41155
UniProt:
A0A1B1KL36
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All DBs
Position
714880..715800
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AA seq
306 aa
AA seq
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MADKVAVLLGGTSAEREVSLQSGAAVLAGLREAGIDAHGIDIRDFPVTQLKEHGFTKVFI
ALHGRGGEDGTLQGMLEFLELPYTGSGVMASALTMDKWRTKMVWQSMGLPVAPYVALNRR
QYAGAEKQSLIARVEALGLPLIVKPSREGSSVGMSKVTERTALEAALEEGFRHDDDVLVE
KWLSGPEYTVAMLGDQVLPSIRIQPAGVFYDYQAKYISDDTQYFCPSGLGAEQEAEMAAL
ALRAYRGLDCSGWGRVDVMQDSDGSFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagttgccgtactgctgggtggcacctccgctgaacgtgaagtgtcattg
caatcgggcgctgccgtgctggcagggctgcgggaagccggtatcgacgcccatggcatc
gatatccgcgatttcccggtaacccagcttaaagaacatgggtttaccaaagtgtttatc
gcgctgcacgggcgtggtggcgaggatggcaccctgcaggggatgctggaattccttgag
ctgccttataccggcagtggcgtgatggcgtcggcgctgaccatggacaagtggcgcacc
aagatggtgtggcagtcgatggggctgccggtcgcaccttatgtggcgctgaaccgccgg
caatatgccggcgcagagaaacagagcctgattgctcgcgtggaggctctgggcctgccg
ctgatcgtcaagccgagccgcgaaggctccagcgttggcatgagcaaggtgaccgagcgc
actgcccttgaggccgcgctggaagaaggtttccgccatgacgacgacgtgctggtggag
aagtggctgagcggccctgaatacaccgtagccatgctgggtgaccaggtgctgccttcg
atccgcattcagccggccggcgtattttacgactaccaagccaagtacatttcggacgat
acccagtatttctgtccaagtggcctgggcgctgaacaagaggccgaaatggccgcattg
gccttacgtgcctaccgtgggctggactgcagcgggtggggccgcgtggatgtgatgcag
gatagcgatggcagcttctatctgcttgaggtgaacacctcgccgggcatgaccagtcat
agcctggtgccgatggcagcgcgccagtctggtttaagcttctcgcaactggtagcgaga
attttggagttggccgactga
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