Sphingobium sp. MI1205: K663_19438
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Entry
K663_19438 CDS
T04383
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spmi
Sphingobium sp. MI1205
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spmi03021
]
K663_19438
Transcription machinery [BR:
spmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K663_19438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_1
Cas9_b_hairpin
GerE
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AMK20246
UniProt:
A0A126RE14
LinkDB
All DBs
Position
pMI1:complement(52200..52766)
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AA seq
188 aa
AA seq
DB search
MTACLPDCSDGELAALALGGRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVA
AFAALNRYDVTRPFQVWMSRIVINKCHDWRRRRAVRNFFALALPLGEADGVADDAPLPDQ
AIGAEQQLAQAMKAIAALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARAR
LSEILKKV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtgcctccccgactgctcggacggggagctcgcggctctggcgcttggaggc
cggcaagcggcctatggcgagctggtccgccggcatcaaggttgggttcaccggctcgtg
cgcagccatgtcggatctatggatgaggcattggatgtcacccaggcgagcttcgtcgcg
gcctttgccgcactcaaccgctatgacgtaacccgacccttccaggtctggatgtcccgg
attgtcatcaacaaatgccatgactggcggcgtcggcgagcggttcgaaatttctttgcc
ctagccctaccgctcggcgaggcggacggcgtcgccgacgacgcaccgctgcccgatcag
gcgatcggggccgaacagcagctcgcgcaagcaatgaaagcgattgctgccctgccgtct
tccctcaaggacacgcttattttgcgtacgatcgacgagaaatcggaagctgaaaccgcc
gaaattctcgggatcagccagaaggcggtcgaaacgcgcctctatcgagctagggcacgc
ctttcggaaatattaaagaaagtttga
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