Schizosaccharomyces pombe (fission yeast): SPAC23H3.10
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Entry
SPAC23H3.10 CDS
T00076
Symbol
ssr2
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SPAC23H3.10 (ssr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPAC23H3.10 (ssr2)
03036 Chromosome and associated proteins [BR:
spo03036
]
SPAC23H3.10 (ssr2)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SPAC23H3.10 (ssr2)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SPAC23H3.10 (ssr2)
PBAF complex
SPAC23H3.10 (ssr2)
GBAF(ncBAF) complex
SPAC23H3.10 (ssr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
ZZ
Motif
Other DBs
NCBI-GeneID:
2541851
NCBI-ProteinID:
NP_593800
PomBase:
SPAC23H3.10
Ensembl:
SPAC23H3.10
UniProt:
O14470
LinkDB
All DBs
Position
I:2511048..2512846
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AA seq
503 aa
AA seq
DB search
MTLDQVRIPFLVEQTYPIIVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYR
DFMINSYRLEPNEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPP
ISGHVQAISNTPIVTQEMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEED
EKSDKVPRVDKVCFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAI
DFNHDEEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPYRQK
LQGDFSPFKKGFLPFDENENPVLSTLTYLASIVQQGMKERKQNESVKQGETSFGNSEFKN
PLERVAYYALKSAAQKAKLIAAFENRQLRRLVFSLIQAQLEKLQLKMKVLEQLEKMCSLE
LSELDLRGKNLLLSRLSTKKMLLAFNKKLEEAVNLGGEDGLKIIDDLMSTEHAEALLTFE
MPTATTVSPLSKQYPDKFRTIAL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgatcaagttcgcataccctttctggtggaacaaacttatcccatcattgtt
ccttcttatgcaggatggtttgacatgtcgaaaatacacgatattgagcgaaggtcgaat
cccgaattttttaatggaaaatctcctctcaaaactccttctatatacaaggactataga
gattttatgattaattcatatcgtttagaaccaaatgaatacctgacagttactgcatgt
cgtcgaaatcttgttggtgatgtttgtgctataattcgcgtgcatgcatttctcgaacag
tggggcttaattaactatcaaatcgatcctgaaacgcgacctgcattccgacttcctcct
atttcaggacatgttcaagctattagtaatactccaatcgtcacgcaagaaatgttagct
caacaccctcctcctagtaccgtcggtggatcttcgagccaagaatttgttaaattagaa
gaaaagcattacagccctagtttaaatgcaatggaacaaacctctcccaaagaagaagat
gaaaaaagcgacaaagtccctcgagtcgataaagtttgtttcacttgcggtgttaattgc
tctcaaacttggtatcacaacttaaaaaacaaaaaatatgacatctgtccaaactgttat
aaacaagggaggttttcttcttcctttaattcctctgattttttgtgcatggatgcgatt
gatttcaatcacgacgaggaaaaaccatggtctaaccaagaaactttgcttttattagaa
gctattgaaacttatggagacgactggaatcaaatagctttacatgttggatcacgaact
aaagagcaatgcttgattcatttcctccagattcctatagaggatccctatcgacagaaa
cttcagggtgacttttccccatttaaaaagggatttttgccctttgatgaaaatgaaaat
ccagttttaagtactttaacatatttggcttccattgttcaacaaggcatgaaagagcgc
aagcaaaatgaatcagtgaaacaaggagaaacctcctttgggaattccgagtttaaaaac
ccactagagagggttgcttattatgctttaaaatctgctgctcaaaaagcaaaattgatt
gcagcgtttgaaaatcgccagcttcgacgcttggttttttcgttaatccaggctcagctt
gagaagttacagcttaaaatgaaggtgcttgaacaactcgaaaagatgtgttctttagaa
ttatctgaactcgatcttcgtggaaaaaacttactactaagtcgtttgtctactaaaaaa
atgcttcttgcgtttaacaagaaattggaagaagctgttaatttgggcggtgaagatggt
ttgaaaataattgacgatttaatgagtacagaacatgcagaagcattattgacatttgag
atgcctacggcaacaaccgtttctcctttaagtaagcaatatcccgataaatttcgtaca
attgctttataa
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