Schizosaccharomyces pombe (fission yeast): SPAC27E2.10c
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Entry
SPAC27E2.10c CDS
T00076
Symbol
rfc3
Name
(RefSeq) DNA replication factor C complex subunit Rfc3
KO
K10756
replication factor C subunit 3/5
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03030
DNA replication
spo03410
Base excision repair
spo03420
Nucleotide excision repair
spo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAC27E2.10c (rfc3)
03410 Base excision repair
SPAC27E2.10c (rfc3)
03420 Nucleotide excision repair
SPAC27E2.10c (rfc3)
03430 Mismatch repair
SPAC27E2.10c (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spo03032
]
SPAC27E2.10c (rfc3)
03036 Chromosome and associated proteins [BR:
spo03036
]
SPAC27E2.10c (rfc3)
03400 DNA repair and recombination proteins [BR:
spo03400
]
SPAC27E2.10c (rfc3)
DNA replication proteins [BR:
spo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SPAC27E2.10c (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
SPAC27E2.10c (rfc3)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SPAC27E2.10c (rfc3)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SPAC27E2.10c (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
SPAC27E2.10c (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
DUF815
AAA_22
AAA_11
RuvB_N
AAA_24
AAA_19
AAA_16
DNA_pol3_delta
AAA_30
TniB
AAA_7
ResIII
DEAD
AAA_5
Mg_chelatase
zf-C2H2_2
AAA_3
Viral_helicase1
bpMoxR
ATPase_2
Motif
Other DBs
NCBI-GeneID:
2541493
NCBI-ProteinID:
NP_001342879
PomBase:
SPAC27E2.10c
Ensembl:
SPAC27E2.10c
LinkDB
All DBs
Position
I:complement(4034145..4035920)
Genome browser
AA seq
342 aa
AA seq
DB search
MSIEKGKGRAMDIDLPLGSESTLPWVEKYRPANLEDVVSHKDIISTLEKFISSNRVPHML
FYGPPGTGKTSTILACARKIYGPNYRNQLMELNASDDRGIDAVREQIKNFASTRQIFAST
FKMIILDEADAMTLAAQNALRRVIEKYTKNVRFCIICNYINKISPAIQSRCTRFRFQPLP
PKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKALNILQACHAAYDHIDVSAIYNC
VGHPHPSDIDYFLKSIMNDEFVIAFNTISSIKQQKGLALQDILTCIFEALDELEIKPNAK
IFILDQLATIEHRMSFGCSEKIQLSAMIASIKTGVDLAAKVN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgaaaaaggtaaagggcgtgcaatggacattgaccttcctttgggaagtgag
agtacgctcccatgggtggaaaagtaccgaccagctaatttagaggatgtggtttctcac
aaagatatcatatctacgcttgaaaaattcattagttcaaatagagtccctcatatgctg
ttttatgggccacctggcacaggcaaaacctctacaattcttgcgtgtgctcgaaaaatt
tatggaccaaattacagaaatcagttgatggagttaaatgcaagcgatgatcgtggtatc
gatgccgtgagggaacaaatcaaaaattttgccagcacccggcaaatctttgcatctact
ttcaaaatgattatattagatgaagccgatgccatgactttggcggctcaaaatgcttta
cgaagagtaattgaaaaatatactaagaacgttcgtttttgcattatctgtaactatatc
aacaaaatatctcctgctattcaatctagatgtaccaggtttcgcttccagcctttaccg
cccaaagagatagaaaaaacggttgatcatgttattcaaagcgaacattgtaatattgac
cctgatgcaaagatggccgtattaaggctttccaaaggagatatgaggaaagcactgaat
atactccaggcgtgccatgctgcctacgatcatattgatgtatctgctatctataattgt
gtaggccatcctcacccttccgatattgattattttttgaaatctatcatgaatgatgaa
ttcgtaatcgctttcaataccattagctcaatcaaacagcaaaagggtttggccttgcaa
gacattttgacatgtatctttgaagcactagacgagcttgaaataaaaccaaatgctaaa
atttttattctggatcagcttgcaacgattgaacatcgaatgtcttttggatgttctgaa
aaaatacagctttcagcaatgatagcgagcattaaaactggtgttgatttagcagcaaag
gtaaattga
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