Schizosaccharomyces pombe (fission yeast): SPBP8B7.09c
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Entry
SPBP8B7.09c CDS
T00076
Symbol
los1
Name
(RefSeq) putative karyopherin exportin T Los1
KO
K14288
exportin-T
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPBP8B7.09c (los1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
SPBP8B7.09c (los1)
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SPBP8B7.09c (los1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
2541311
NCBI-ProteinID:
NP_596516
PomBase:
SPBP8B7.09c
Ensembl:
SPBP8B7.09c
UniProt:
O94258
Structure
PDB
LinkDB
All DBs
Position
II:complement(3647074..3650172)
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AA seq
978 aa
AA seq
DB search
MSAQDVENAVEAALDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRLI
CLQTLSEKVREWNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLY
PSNWNDFFASLQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAI
RANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVSWININLIVNEPCMNLLYSFL
QIEELRCAACETMTEIVNKKMKPLEKLNLLNILNLNLFFSKSQEQSTDPNFDEHVAKLIN
AQGVELVAIKSDPSELSPELKENCSFQLYNLFPYLIRYLSDDYDETSTAVFPFLSDLLVS
LRKESSSKELSASLKEFLKSLLEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKLKIFQ
DTINSIDSSLFSSYMYSAITSSLSTAATLSPENSWQLIEFALYETYIFGEGLRGPDAFFN
EVDKSPTVLSQILALVTTSQVCRHPHPLVQLLYMEILVRYASFFDYESAAIPALIEYFVG
PRGIHNTNERVRPRAWYLFYRFVKSIKKQVVNYTESSLAMLGDLLNISVSPVTDMDAPVP
TLNSSIRNSDFNSQLYLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAALSSDLSA
LENIISVYCSLMAIGNFAKGFPARGSEEVAWLASFNKASDEIFLILDRMGFNEDIRGAVR
FTSGRIINVVGPDMLPKVPQLISILLNSIDMNELVDVLSFISQLIHIYKDNMMEITNRML
PTLLMRIFSSLSAAPQGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLI
NSILHFANLVGEPATQKSSIALVSKMVSLWGGKDGIAGFENFTLSLTPLCFEMPVNPNFN
TRDGQSLVVLGELAGLQKIILEKLGDIYKSYLVTVYFPTVNFPDVMASEYLQALSNLDSR
SFKQFFQKFIQALKSGNV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccaggatgtcgaaaacgcagtagaagcagcattagatccttctgtaggacca
ataataaagcaacaagctacagattttattggtagccttagaagctcatctacaggttgg
aaaatatgccatgaaatttttagtgaaaaaacgaaatataaaccatcaacaagactgatt
tgccttcaaactcttagtgagaaagttagagaatggaacaatgaaagcaatttgttagag
ttacagatgataagagacagtgtttggtcttatattaaggaattaagctttttggatgaa
ccagcttatattagtaatgctgtacaacatttattgacattattgtttcttcaactatat
ccaagcaactggaatgatttttttgcttcactccaaggcgttattgcggcgtcgtctcaa
tctgagttttcaaatttttatttgaaggttttactttccatcggcgatgagattgctgat
tcattggttttaaagacagatgttcaaattcaaaaagataatttagtaaaagatgcaatt
agggcaaatgatatgtctgatatcgtttcattcgtctatgaaatgatgttggcctatagt
aatgctaaaaactatggcacggttggattgtgccttcaagtatatgcacagtgggtatct
tggatcaatataaatttgatagttaatgaaccgtgtatgaacttgttatactctttcctt
caaattgaagaattacgttgcgctgcatgcgagacaatgaccgaaattgtgaataagaaa
atgaagccacttgagaaacttaatctgctcaatattcttaacctgaatttgttcttttca
aagtcgcaggaacaatccactgatcctaacttcgacgaacatgtcgccaagttaataaat
gcacagggtgttgaacttgtcgctataaaatccgatccttcagaacttagtccagagttg
aaagaaaattgctcatttcagctctacaatctttttccataccttatcagatatctttct
gatgattatgatgaaacctcgacagcagttttcccctttttgtccgacttacttgtctca
cttaggaaagaatcttcttccaaagaacttagtgcttctttaaaagaatttcttaaatct
ctgctagaagctattataaagaaaatgaaatatgatgaatcacaggagtgggatgacgat
cctgatagcgaggaagaggccgaattccaagaaatgcgtaaaaaattaaagatttttcaa
gataccattaactctattgattctagtctattttcttcgtacatgtattctgctataact
tctagtttatctactgctgctacattatctcctgaaaattcatggcagcttattgagttt
gcgctatatgaaacctatatttttggtgaaggattgcggggtcccgatgcattttttaat
gaagttgataaatctccgactgttctttctcaaatactagcattagttaccacttcacaa
gtttgccgacatcctcatccgttagttcagcttctgtacatggaaatattagtacgatac
gctagtttcttcgattacgaatctgcggctattcccgctttaatagaatactttgttggg
cccagaggaatacataacacaaatgaacgtgttcgtccaagagcatggtatctgttttat
cgatttgttaaaagcattaagaaacaagttgtaaattatactgaatcatctctcgccatg
cttggtgatctattaaatataagtgtttctcccgttactgatatggatgcgccagtaccg
acattaaattcctccataagaaatagtgattttaactctcagctctatttatttgagact
gttggtgtcttaatttcttcaggtaacttaactccagaagaacaagctctttactgtgat
tcacttataaatgcacttatcggaaaagcaaatgctgctctttccagtgatttgtcggct
ttagagaacattatttccgtttattgttcgctgatggctatcggtaattttgctaaagga
tttcctgcccgtggttctgaggaagtcgcttggcttgctagtttcaataaggcatcagat
gagatatttttgattttagacagaatgggatttaatgaagatatccgtggagctgtacgc
tttacttctgggagaattattaatgttgtaggacctgatatgttaccaaaggttccacaa
ttaatttccatactcttaaactctatcgatatgaatgaactggttgatgttctttcattc
attagccaacttatacatatatacaaagataacatgatggagattacaaatcgtatgctt
ccaacattactaatgcgtattttttcttctctatcggccgctccacaaggaacagatgat
gctgtcaagcaaaacgatttacgaaaatcatatatttcatttatactacaactattaaac
aaggggtttggatcaatcctctttactgaagaaaatcaggtttactttgatccacttatt
aacagtatcttacattttgcaaacttggtgggtgagccagctacacaaaaaagttctatc
gctttagtttctaaaatggtttccttatggggaggtaaggatggaattgctggattcgaa
aattttactttatcattgacaccattatgttttgaaatgcctgttaacccaaattttaac
acccgtgatggtcagtctttggtagttttaggggaactggctggattacaaaaaataata
cttgaaaagctaggtgatatatacaagtcatatcttgtaacggtgtattttcccaccgtc
aactttccggacgtaatggcttctgaatatttacaagctttatcaaatctggatagtaga
tcattcaaacaattttttcaaaaatttattcaagcattaaaaagtggtaatgtatga
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integrated database retrieval system
