Schizosaccharomyces pombe (fission yeast): SPCC18.08
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Entry
SPCC18.08 CDS
T00076
Name
(RefSeq) putative lysine--tRNA (Lys) ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPCC18.08
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spo01007
]
SPCC18.08
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spo03016
]
SPCC18.08
Enzymes [BR:
spo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPCC18.08
Amino acid related enzymes [BR:
spo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPCC18.08
Transfer RNA biogenesis [BR:
spo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPCC18.08
Prokaryotic type
Other AARSs
SPCC18.08
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DsrC
Motif
Other DBs
NCBI-GeneID:
2539141
NCBI-ProteinID:
NP_588387
PomBase:
SPCC18.08
Ensembl:
SPCC18.08
UniProt:
O74858
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Position
III:1970713..1973665
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AA seq
531 aa
AA seq
DB search
MISRGLLSKGILSIIKRKNTGNLIPHVYYSEYHADIEERRKALGRLGISLYPSVTSDAST
TTIPVIIEKWRNKITKSEIAMVRYTVCGRISSIRYSGSKLAFFDVLYGNKKLQVVFNKKN
IGTEEEMKGKFIPRLKALQKGDCIQCSGNVGRSGSGELSIYATELPKLLSPCLHPIPVKL
TNYEKRFEKRFVDMMSNTKSLELLEKRYRIIESIRKFFSERGFLEVETPILSHHFGGATA
RPFITSDIHKLPLTLRCAPELWLKQLVIGGMNRVFELGKNFRNEGIDATHNPEFTSCEAY
CAYLNLEGMKKLTEELIRFICLTINGNLQISGQTVDLEKGFEVIEFIPALQKELNVELSP
LDNSENCRKQLISIFKRCEIMLPKTCTVAHLLDKLFDSLVLKYNTSSPKFVINHPEVMSP
LAKSDIKLYGAVEQRISKRFELYIGGYEICNAYEEENDPVAQYHKFQAQKYDRLQLGDDE
TPAPDSDFVHALEYGLPPTAGWGMGVDRLVMLMTGQSKISEILPFGSLRYV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatttcacgaggtcttttatccaaagggatcttatccattattaaaagaaaaaataca
ggaaatttaatcccccatgtttattatagtgaataccatgcagacatcgaagagagaaga
aaagcgctaggacgactgggaatcagcttgtatccgtcagttacttcagatgcctcaacg
actacaattcctgtaataatcgagaaatggaggaacaagattaccaagtctgagatcgca
atggtcaggtatacggtgtgtggtcgaatttcaagcatccgttattcaggttccaaactt
gcattttttgatgtcctttatggaaataaaaagcttcaggttgtttttaataaaaagaat
attggcacagaagaagaaatgaagggaaagtttattcctcgattaaaagctctccaaaaa
ggagattgcattcaatgttctggcaacgttggaagaagtggaagtggagagctttccata
tatgctacagaactaccaaaattgttatctccatgtctccatccaattcccgttaaacta
acgaactacgaaaaaagatttgaaaaacgctttgtcgatatgatgtcaaataccaaatca
cttgagttacttgagaagagatatcgaataattgaatccattagaaaattctttagtgaa
agaggatttttagaagttgaaacccctattctttcacatcactttggaggtgctactgcg
cgaccctttatcactagtgatattcataaactacccttgacactccggtgtgctccagag
ctatggctcaaacaactagtaatagggggaatgaatcgagttttcgaattaggaaaaaat
ttccgaaatgaaggtatcgatgctacgcataatcctgagtttactagttgtgaagcctac
tgcgcatatttaaatttggagggtatgaaaaaacttactgaagagctaattagatttatc
tgtttaacaattaatggaaacttgcaaataagcggtcaaaccgtagacctagaaaaagga
tttgaagtcattgagtttattcctgcattacagaaggagcttaatgtagagctttcccct
ctagataactctgaaaactgccggaaacagctgatatcaatctttaaacgttgtgaaatc
atgctgccaaagacgtgtacagtagctcatttgttggataaacttttcgattctttggtc
ttaaaatataatacctcttcccctaaatttgtcattaaccatcccgaagtaatgtcacct
cttgccaaatcagatatcaaattatacggcgctgtcgagcaacggatttcaaaaagattt
gagctttatattggtggctatgaaatatgtaatgcctatgaggaagaaaatgatccagtt
gctcaatatcataaatttcaagcacaaaaatatgaccgtcttcaactaggagatgatgaa
actcccgcgccagactctgattttgtacatgccttggaatacggtttaccacctacagct
ggatggggaatgggcgttgatagactagtcatgctaatgacaggacagtcaaagatatcg
gagatccttccatttggatctcttcgatatgtttag
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