Schizosaccharomyces pombe (fission yeast): SPCC645.08c
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Entry
SPCC645.08c CDS
T00076
Symbol
snd1
Name
(RefSeq) RNA-binding protein Snd1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Gemin6
Motif
Other DBs
NCBI-GeneID:
2539488
NCBI-ProteinID:
NP_588117
PomBase:
SPCC645.08c
Ensembl:
SPCC645.08c
UniProt:
Q9Y7U7
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Position
III:complement(1249494..1252275)
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AA seq
878 aa
AA seq
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MSQYVSSMIKYAQSGDSFNILIKDNAKKITEKQFSLAYVECPRFRREGDEPFAFEAQEFS
RRLVVGRPASVSTLYVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSENS
YFVSLEEAQDHAQQYKLGIWGPSDDVVVTEKANPANPAKFLKAHKGKKLNGIVETIRNGD
QVRVRLFLSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAKQFVVTRLLQR
NVVIELLDLAPNGVSFLGNVLHPAGNIATFLLSSGLGRVADNHISALGPETMQSLRTIER
KAKISRLGIWKNISVSIPDINSLSLKDYSAVVSRVISTDTLEVRKDNGVECRIQLSSIRH
PRPSNEKEAPYQLEAREFLRKKIIGKRVQVSLDFIRPGQNDLPAINNCTVKLSDGTNVAL
MVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGKKPAYENIVNASESSL
RSRQYLSSLQRTRKLSVIIENVISGSRFRCFCPKENCYFMFACAGIRTPRTARNDQEKGE
PFAEESLSLAKSLLQHDAQVEILSVDNNGCFLGDIYVNHDTNFALKLLSQGLAWCQGYAS
QSNVQYSQYHDTEAAAKEQKVGMWHDYVPPEKKAASTEKESENTVKEPIYLDIVLSDIAE
DGKFSFQIIGTGIQQLETLMSDLGSLKKSFKPSEKINVGMNVAAISALDNAMYRGRVLRC
DRENQAADVLLYDYGSVEQIPFKNISSLPDTYTKLKPQAQLARLSYVQLPPPSSDYYEDA
RLVFRELAMNKGLVAKVDGHEGNVYSVTLYNPSDGSDFSDCINAQLVALGMASVIPKKKT
SHFEKDTASLNILEEHQQEARLNHIGFWVYGDPLEYED
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtatgtatcgtccatgattaaatatgcccaaagcggtgatagttttaatatt
ttaataaaagataatgccaaaaaaattacagagaaacagttctctctcgcgtacgtagaa
tgtccgcgttttcgtcgtgaaggtgatgaaccatttgcctttgaagcccaagaattttct
aggcgactcgttgttggacgtcctgcttcagtttctactttgtacgtgattcctacgtcg
aaacgcgagtatggacgtatccgtacttctgaatttgacttggctgaatcgttattgcgc
gaaggccttgcaaaattaagacctgaggctacccgtaatgagggtacttctgagaactcc
tattttgtttctctagaagaagcgcaagatcatgcccagcagtacaaattaggaatatgg
ggcccttctgacgatgttgttgtaactgagaaagccaacccagcaaacccagctaagttt
ttaaaggcccataaaggtaaaaaactgaacggtatcgttgaaaccatccgcaatggagac
caagttcgtgttcgactatttttgagccccaagcaacatcaactggttacaatcagtctt
gctggagttagatgccctcgttctactttcactgctacttcacctgagcagactagctca
gagcaagaaccttgtggtgatgaagctaagcagtttgttgtcactcgtctccttcaaaga
aacgtggtaattgaacttctcgatttagctccaaacggtgtctcgtttttgggtaatgtt
ttacatcctgcaggaaatatcgcaactttcttgttaagctctggattgggacgtgttgct
gacaaccacatatctgctttgggacctgagactatgcaaagtttacggaccattgaacgt
aaagctaagatttctcgtttaggaatttggaaaaatatttctgtctctatccctgatatc
aattctctctcgttaaaggattattctgcagttgtatccagggtcatttccaccgatact
ctcgaagttcgcaaagataatggcgtggagtgtagaattcagcttagcagcatccgtcat
cccagaccttcaaatgaaaaggaagccccttaccaattggaagctcgcgagtttcttcgc
aagaaaattattgggaagcgtgttcaggtctcgctagacttcatccgacctggtcaaaat
gaccttcctgctattaacaactgtactgtcaagctttctgatggtacaaatgttgcttta
atggtcgtaaagagtggatacgctacagttataagatatcgaatggatagcgttgatcgt
tcacccatttatgattttcttatagaagctgaaaaggccgctcaagaaggacgcaagggt
atgtggtctggtaaaaaacccgcttacgagaatatcgttaatgcttctgaatcttcttta
cgctctcggcaatacctttcctctttgcaaaggacccgtaagctttctgtcatcatcgaa
aacgtaattagtgggtctcgtttccgttgcttttgccctaaagaaaactgctattttatg
tttgcatgtgcaggtattcgaactcctcgcactgctcgtaacgatcaggaaaaaggtgaa
ccttttgcagaagaatctctttctttagcaaagtccttgttgcagcatgatgctcaagtt
gagattttgtctgttgataataatgggtgctttttaggtgatatttatgtcaatcatgat
actaactttgctttgaaattgctcagtcaaggtcttgcttggtgccaaggttatgccagt
caatcaaacgtacaatactcgcaatatcatgataccgaagctgctgctaaggagcaaaag
gttggcatgtggcacgattacgttccccctgaaaagaaagctgctagtaccgagaaggaa
agtgaaaataccgttaaagagcctatctatctcgatattgtactaagcgatattgcagaa
gacgggaagttttcattccaaattattggtactggtattcaacaattagaaactttaatg
tctgatttaggttctttaaagaagtcctttaaaccatccgagaaaattaatgttggaatg
aacgttgcagcaatatctgctcttgacaacgctatgtatcgaggccgggtgttgcgttgt
gaccgagaaaaccaggccgctgatgttttgctttatgattatggtagtgtagagcaaatt
cctttcaaaaacatatcctctttaccagatacctatactaaattgaagcctcaagcgcaa
cttgctcgtctcagttacgttcaattacctcctcccagctctgattactatgaagacgca
agactcgttttcagggagctagccatgaataaaggtctagtggctaaagtcgatggacac
gaaggaaacgtgtattctgtaactttgtataatcctagtgatggttcagatttttctgac
tgtattaatgcccaactggttgcgctcggcatggctagtgttattcccaagaaaaaaaca
tctcactttgaaaaagataccgcatccctcaatattctagaagagcatcagcaagaagca
cgtctaaatcatatcggtttctgggtatatggtgatcccctagaatatgaggactaa
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