Spongiibacter sp. IMCC21906: IMCC21906_01319
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Entry
IMCC21906_01319 CDS
T03945
Name
(GenBank) Factor for inversion stimulation Fis, transcriptional activator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spoi03000
]
IMCC21906_01319
03036 Chromosome and associated proteins [BR:
spoi03036
]
IMCC21906_01319
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_01319
Transcription factors [BR:
spoi03000
]
Prokaryotic type
Helix-turn-helix
Other families
IMCC21906_01319
Chromosome and associated proteins [BR:
spoi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IMCC21906_01319
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IMCC21906_01319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AKH68997
UniProt:
A0A0F7M404
LinkDB
All DBs
Position
complement(1420649..1420948)
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AA seq
99 aa
AA seq
DB search
MNLHAIDAEVIGASPEPSNADIAKAKTLRDSVAIALNAYLSSLDGQDVCDVYNMVLSEVE
APLLEEVMKYTRNNQTRASQLLGLNRGTLRKKLKQYDLL
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacacgccattgatgccgaggttatcggcgccagcccagaacccagcaacgct
gatatcgccaaggcaaaaacactgcgcgacagtgttgccattgccttaaatgcctacctg
tccagcttggacggtcaagatgtttgtgatgtttacaacatggtgctcagtgaagtggaa
gccccacttttagaagaggtgatgaaatacacccgcaacaaccagacccgcgcctctcag
ctgctgggactgaatcgcggtacgttgcgcaaaaaactcaagcaatacgatttgctataa
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