Spongiibacter sp. IMCC21906: IMCC21906_02216
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Entry
IMCC21906_02216 CDS
T03945
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi00020
Citrate cycle (TCA cycle)
spoi00785
Lipoic acid metabolism
spoi01100
Metabolic pathways
spoi01110
Biosynthesis of secondary metabolites
spoi01120
Microbial metabolism in diverse environments
spoi01200
Carbon metabolism
spoi01210
2-Oxocarboxylic acid metabolism
Module
spoi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spoi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IMCC21906_02216
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IMCC21906_02216
Enzymes [BR:
spoi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
IMCC21906_02216
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AKH69879
UniProt:
A0A0F7M6K0
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All DBs
Position
complement(2361105..2363939)
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AA seq
944 aa
AA seq
DB search
MQKASMELLWKSSHISGGNASYVEALYETYLTDPNAVPEEWRNYFQQLPRSSEQSLNDIP
HSPIREHFAKLARTPVRVNGVGGGEISEHERKQVRVIQLVSAYRQRGHQEAKLDPLELWQ
RSRVPDLELQYHQLSDADMDTVFQTGSLYIGKDSATLREIYDAIRDTYCRSVGAEFMHIV
DTRERTWIQQRMESVRSQPVYSEEARSHLLERLTAAEGLEKSLGSKYPGTKRFGLEGAES
LIPMMDALIQRAGSYGAKEMVIGMAHRGRLNLLVNILGKNPAELFDEFEGKVKYQGSADV
KYHQGFSSNVMTPGGEVHLALAFNPSHLEIVSPVVEGSVRARQDRRNDPVGDKVVPIVLH
GDAAFAGQGVVMETFQMSQTRAYKTGGTIHIVINNQVGFTTSRQDDARSTEYCTDVAKMV
QAPIFHVNGDDPEAVWFVSQLAADFRQEFKKDVVVDLVCYRRRGHNEADEPSGTQPLMYS
IINKQKTTRTLYVNKLIEEGFISKDAAASLAADYRQALDNGEHVAKSLVKEPNKELFVDW
TPYIGHAWDVPGDTSVEAKFLKTVADGINHIPEGVSVQRQVAKIYEDRRKMAVGAMPINW
GFAETLAYGTLLKQGMQVRITGQDVGRGTFSHRHAVIHNQKDGERYVPLQNLSEDQAEFD
IYDSLLSEEAVLAFEYGYSTTQPNALVVWEAQFGDFANGAQVVIDQFISSGELKWARLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCAEHNIQVCVPSTPAQVYHMLRRQVVRPLRRPL
VVMSPKSLLRHKEAVSTLEELHSGQFQSVIDETDDLDKTKVTRLVLCCGKVYYDLRNARR
EHSKDSIAIVRLEQIYPFPYEDLRKVIAQYPNLKKVVWCQEEPRNQGAWYNSRHRMARVI
RSFKPEKNLLLGYVGREPSASPAAGYMALHLEQQERFITEALKL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcatcaatggagttgctgtggaagagctcccatatttcgggtggcaatgcg
agctacgtagaagctctgtatgaaacctacctcactgatcccaatgccgttccagaagaa
tggcgcaattattttcaacagctgccgcggtccagcgagcagtcactcaatgatattccc
catagtcctataagagagcatttcgctaaattggcgcgaacgcctgtgcgcgtcaatggt
gtcggtggcggggaaatcagtgagcacgagcgcaagcaggttcgtgtcatccagttagtt
agcgcctatcgccaacgcggccatcaagaagctaagctcgatccgctggagttgtggcag
cgcagtcgtgttcccgatctagagctgcaatatcatcagctcagcgatgcggatatggat
accgtgtttcaaaccggtagtctctatatcggtaaagacagtgcgaccttacgtgaaatc
tacgatgctattcgtgacacctattgccggtcggtgggtgctgaatttatgcatattgtc
gatacgcgagagcgcacctggatacagcagcgcatggagagcgtacgctcccagcctgtc
tatagcgaagaagcgcgtagtcatttacttgagcgcttaaccgccgcagaaggcttggaa
aaatccttgggttctaaatatccaggcaccaagcgctttggtcttgaaggtgccgagagc
ctgattcccatgatggatgcgctaatccagcgagctggatcttacggcgccaaagaaatg
gttatcggcatggctcaccggggccgcttaaatctgctggtcaatattttgggtaaaaac
ccggccgagctgtttgatgaatttgaaggcaaggttaaataccaaggctctgccgatgtt
aaataccaccagggtttttcatctaatgtcatgacacccggtggcgaagtgcatttggcg
ttggcctttaatccctcgcatctggaaattgtgtcccccgttgttgaaggctctgttcgc
gcccgccaagatcgccgtaacgatcctgttggtgacaaggtagtgccgattgtgctgcat
ggtgatgccgcatttgcggggcagggggtggtgatggaaaccttccagatgtcccaaacc
cgggcgtataaaaccggcggcaccattcatatcgttatcaacaaccaggtgggctttacc
accagccgtcaagacgatgctcgctctacagaatactgtaccgacgttgccaaaatggtt
caggcgcctattttccatgttaatggcgacgacccagaagccgtttggtttgtaagtcag
ttggcagcggatttccgccaagagtttaagaaagacgtggtagttgatctggtgtgttat
cgccgtcggggtcacaacgaagcggatgagccctcgggcacccagccgttgatgtactca
atcatcaacaagcaaaaaactacccgcacgctctatgttaacaagctcattgaagaaggc
tttatttccaaagacgctgcagcatcgttggctgccgattatcgacaggcgttggataat
ggcgaacacgttgccaagagtttagttaaagagcctaacaaagagctgtttgtcgattgg
actccctacattggtcacgcttgggatgtacccggcgataccagtgttgaagccaaattt
ttgaaaactgtggccgatgggattaaccatattcccgaaggcgtaagtgtgcaacgtcag
gttgccaagatctatgaagatcgccgcaaaatggcggtaggtgcaatgccaatcaactgg
ggctttgccgaaacactggcttatggcaccttgctaaaacaaggtatgcaggttcgtatt
acgggtcaggatgtgggtcgaggtaccttctctcatcgccatgcggttatccataaccaa
aaagatggcgagcgctacgttccattacagaatttgtctgaagatcaggctgagtttgat
atctacgactcgctgctatccgaagaagcagtgctggcgtttgagtatggttactcgacc
acccagcccaatgccttggttgtttgggaggcccagtttggcgattttgccaacggtgct
caggttgttatcgatcagtttatcagcagtggtgagctgaaatgggcacgtttgtgtggc
ttaaccatgttgctgcctcacggctatgaagggcaggggccggaacattcatcggctcgc
ctggagcgcttcctgcagctgtgtgcagagcacaatattcaggtttgcgtaccttcaaca
ccggctcaggtttatcacatgttgcgtcgacaggtggttcgtccattgcgtcgtccgcta
gttgtcatgtcgcctaagagcttgttgcgtcacaaagaagctgtctctactctggaagaa
ttgcacagtggtcaattccaaagcgttattgacgaaacagatgatttggataaaaccaag
gtcacccgcttagtgctctgttgcggtaaggtgtattacgacctgcgcaatgctcgccgt
gagcacagcaaagactctattgcgattgtgcgcttggagcagatttaccccttcccttat
gaagacttacgtaaggtgattgcccagtacccgaacttaaagaaagtggtttggtgtcag
gaagagccacgtaaccaaggggcttggtacaacagccggcatcgtatggcgcgggttatc
cgtagctttaagccagagaaaaacctgcttttgggttatgttggtcgagagccctcggcg
tctccggcagcggggtatatggctttgcacttagaacaacaggaacggtttattactgaa
gctctcaaactttaa
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