Spongiibacter sp. IMCC21906: IMCC21906_02759
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Entry
IMCC21906_02759 CDS
T03945
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMCC21906_02759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_02759
Enzymes [BR:
spoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC21906_02759
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IMCC21906_02759
RecFOR pathway proteins
IMCC21906_02759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Mg_chelatase
AAA_14
nSTAND3
AAA_16
RNA_helicase
AAA_18
AAA_28
AAA_2
ABC_tran
Rad17
NTPase_1
Sigma54_activ_2
AAA_17
AAA_24
RsgA_GTPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AKH70402
UniProt:
A0A0F7M896
LinkDB
All DBs
Position
complement(2952192..2953256)
Genome browser
AA seq
354 aa
AA seq
DB search
MIEVDRLVAADVTETGEERYDRAIRPKALSDYIGQPVVREQMEIFVSAARGRGEPLDHTL
IFGPPGLGKTTLANILANEMQVSLKTTSGPVLEKAGDLAALMTNLEAGDVLFIDEIHRLS
PHIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIVQ
RLEFYGVEDLATIVSRSASILGMPLDKAGALEIARRSRGTPRIANRLLRRVRDYAEVKGN
GTINADIADRALNMLSVDSSGFDHLDRRLLLTMIEKFDGGPVGIDSLAAAISEERGTIED
VLEPFLIQQGFIMRTPRGRVVTNNAYRHFGLDSLGKGVDQAAESDSNNESGTLF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagttgatcgcctggtggctgcagatgtcactgaaactggtgaggagcgctac
gacagggcgattcgacctaaagccctgagcgactatattggtcaaccggttgtgcgtgag
caaatggagatttttgtcagcgctgcccggggtcgaggcgaacccttagatcacaccttg
atttttggccctcccggattgggcaaaactacccttgccaatattcttgccaatgaaatg
caagtctcgctgaaaacgacctctggtccggtgttggaaaaagccggtgacttggcggcg
ttaatgaccaacctcgaagctggcgatgttctgtttattgatgaaattcatcgcttgagc
cctcatatcgaagaggtgctctatccggcaatggaagattaccagctggatattatgatt
ggtgaaggtccggctgctcggtcaattaaactggacttgccaccctttaccttagtgggc
gctactacccgagctggtttattaacgtcgccactacgtgatcgttttggcattgttcag
cgacttgagttttatggtgttgaagacttggctaccatcgtcagccgctccgcatcaata
ctggggatgccactggataaagctggagccctggaaattgcccgccgttcgcggggaacg
ccacgcattgccaaccgcttgctgcgccgggtgagagattatgctgaagtgaagggcaac
ggcacaattaacgcggatattgcggaccgagctttgaatatgctcagtgtcgatagtagt
ggctttgatcatcttgaccgccggttgctgctgactatgattgagaaatttgatggtggc
cctgtggggatagatagtttggcagcggccatcagtgaggagcggggcacgattgaagat
gtattggagcctttcttgattcagcaaggctttattatgcgcaccccaagagggcgtgtg
gtgaccaataacgcgtatcgtcattttggcttagactcgctagggaaaggcgtagatcaa
gctgctgaaagcgacagtaacaatgagtcaggaacgctattttga
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