Shewanella polaris: FH971_10025
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Entry
FH971_10025 CDS
T06579
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spol
Shewanella polaris
Pathway
spol01501
beta-Lactam resistance
spol01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FH971_10025
01503 Cationic antimicrobial peptide (CAMP) resistance
FH971_10025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spol03036
]
FH971_10025
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spol02000
]
FH971_10025
01504 Antimicrobial resistance genes [BR:
spol01504
]
FH971_10025
Chromosome and associated proteins [BR:
spol03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FH971_10025
Transporters [BR:
spol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FH971_10025
Antimicrobial resistance genes [BR:
spol01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FH971_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QDE31284
UniProt:
A0A4Y5YF32
LinkDB
All DBs
Position
complement(2298415..2299521)
Genome browser
AA seq
368 aa
AA seq
DB search
MGTFSRFAIAIVLLLVVIGSIFGYKFYQINQMQAKFSQPRPATVVKTTEVARVSWQPSIQ
SIGGIRAINGVMIANELPGVVTKILFKSGQSVKKGDILIRLNSDIEQAALTTRLAEAQLA
SKAFQHNSDLISKRAVSQFALDETKAALDVARARVKEAEAQFGKKILTAPFDGILGLRLA
DIGENLSVGTPVVEINMLNPILVEYTLSEQELASVDIGDLVEVTVAATGSEVFKGTITAI
NSSITPETRTVKLRAQLLNPQQSLKPGMFATIRTMAEGERQVIAIPNIALSFNTYGDFAY
ALTKNEKGQLVTEQRTLETGVTREGMTEINKGLEPGERIIASGLLRLRAGQRVKIKQNDK
IADSTGVK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggcactttctcacgcttcgcaattgctatcgttctgctccttgtcgtcatcggcagc
atcttcggctacaagttctatcaaattaaccaaatgcaggccaaattctctcagccacgc
cccgcaaccgtcgttaaaactacagaggtcgctagagtatcttggcaaccgagtatccaa
tcaatcggtggcatcagagctatcaacggcgtcatgatagccaatgaattgcccggtgta
gtgacaaaaattttgttcaaatcgggtcaatccgtcaaaaaaggcgatatcctgatccgc
ctaaacagcgatatagagcaagccgctcttacaacacgtctagctgaggcacagcttgct
tcgaaagcatttcaacataactcagacttgatttccaaacgggctgtgtcacagttcgcc
ttagatgaaacaaaggctgcgctggatgtagccagagcacgagtaaaagaagccgaggcc
cagtttggtaaaaaaatactcacggctcccttcgacggcatactaggactgcgtctagcg
gatataggtgaaaacttatctgtgggtacacctgtcgttgaaatcaatatgctaaatcca
attctggtcgaatatactctgtctgaacaggaactggccagcgtcgatattggtgatctc
gttgaagtcactgtggcggcaactggctcagaggtattcaagggaacaattaccgcaatt
aatagctctatcacgccagagacacgcacagttaagctgcgcgcccaacttctaaacccc
caacaaagcctcaaaccgggtatgttcgctaccattagaaccatggcagagggtgaaagg
caggtcattgcaattccaaacatagccctgtcgttcaacacctacggcgatttcgcctat
gcattaactaaaaatgaaaaaggccagctggtgactgagcagcggacattggaaacaggc
gttacacgggagggcatgactgaaattaacaaagggctagaacccggtgaacgtatcatt
gcctctggtttgctgcgcttgagggctggtcagcgagtgaaaataaagcaaaatgacaag
attgcagacagtacaggagttaaataa
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