Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04138
Help
Entry
SPAB_04138 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq02020
Two-component system
spq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPAB_04138
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPAB_04138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spq03021
]
SPAB_04138
Transcription machinery [BR:
spq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPAB_04138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ABX69462
UniProt:
A0A3Z1EFQ0
LinkDB
All DBs
Position
3444081..3445514
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDEIRESMGDVEVDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaggaactccagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacactcagcaa
cctcaggataacgatcctctcgataccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgacgccagttgggatgaaatttacaccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgagctgcccgtctatcagggcgaaacgacgcagtcgttg
caggattatctgatgtggcaggttgagctaacgcccttctcggataccgatcgcgctatt
gcgacatccattgtcgatgcggtagatgataccggttatctcaccgtatccctggacgaa
attcgcgaaagcatgggcgatgtagaggtggatctcgatgaggtcgaagccgtcctgaag
cgtattcagcgttttgatccggtaggcgtcgcggcaaaagatcttcgcgactgtctgctg
atccagctttcacaattcgacaaatccacgccatggctggaagaggcgcggcttattatc
tgcgatcaccttgatctgctggccaaccacgatttccgcacgttgatgcgcgttacccga
ctaaaagaagaggtgctgaaagaggcggtaaacctgattcagtcgctcgatcccagaccc
ggtcaatcgatccagaccggcgagccggagtacgttatcccggatgtgctggtacgcaag
cataacggtcgctggacggtggagcttaatagcgacagtattccccgtttacagattaac
cagcactatgccgccatgtgcaatagcgcgcgcaacgatgccgacagccagttcatccgc
agtaatttacaggatgcgaagtggctgataaaaagccttgaaagccgcaacgacacgctg
ctgcgtgtcagtcgctgcatcgtcgagcaacagcaagccttttttgaacagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccact
atatcccgcgtgaccacgcagaagtatttgcacagcccgcgcggtatttttgaactcaaa
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgcgatt
cgcgcgctggtgaagaagttaattgcggcggaaaaccccgcgaaaccactgagtgacagc
aagttaacctctctgctgtcagaacaaggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
DBGET
integrated database retrieval system
