Streptococcus pneumoniae R6 (avirulent serotype 2): spr0437
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Entry
spr0437 CDS
T00060
Symbol
rpoE
Name
(GenBank) RNA polymerase (delta subunit)
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
spr0437 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spr03021
]
spr0437 (rpoE)
03400 DNA repair and recombination proteins [BR:
spr03400
]
spr0437 (rpoE)
Transcription machinery [BR:
spr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
spr0437 (rpoE)
DNA repair and recombination proteins [BR:
spr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
spr0437 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AAK99241
UniProt:
P66718
LinkDB
All DBs
Position
436031..436633
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AA seq
200 aa
AA seq
DB search
MRRNALELEVFAGQEKSELSMIEVARAILELRGRDHEMHFSDLVNEIQNYLGTSNSDIRE
ALPLFYTELNFDGSFISLGDNKWGLRSWYGVDEIDEEIIALEENDDDEVAPKAKKKRVNA
FMDGDSDAIDYNADDPEDEDAYEADPALSYDDENPDDEKNEVEAYDAEINEIAPDDLGED
VDLNEDDDEFSDDDAETSEE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaacgctttggaattagaagtatttgctgggcaagaaaaaagtgaactatct
atgattgaggtagcgcgtgctatcttggaacttcgtggtcgcgatcatgagatgcatttt
agcgatcttgtaaacgaaattcaaaactaccttggaacatcaaacagcgatatccgcgaa
gctttgcctttgttctacacagagttgaactttgacggtagcttcatctcacttggggac
aacaaatggggtcttcgttcatggtatggtgtggacgaaatcgacgaagaaatcatcgct
cttgaagaaaatgacgacgatgaagtagcaccaaaagctaagaaaaaacgtgtcaatgcc
tttatggatggtgattcagatgccattgactacaatgcagatgatccagaagacgaagat
gcatacgaagcagatccagctctttcatacgatgatgaaaatccagatgatgaaaaaaat
gaagtggaagcttatgatgcagaaatcaacgaaatcgctccagatgacttgggagaagat
gtggatctcaacgaagacgacgacgagttttcagatgacgacgctgaaaccagcgaggaa
taa
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integrated database retrieval system
