KEGG   Streptomyces pristinaespiralis: SPRI_1282Help
Entry
SPRI_1282         CDS       T04073                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
spri  Streptomyces pristinaespiralis
Pathway
spri03030  DNA replication
spri03410  Base excision repair
spri03420  Nucleotide excision repair
spri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPRI_1282
   03410 Base excision repair
    SPRI_1282
   03420 Nucleotide excision repair
    SPRI_1282
   03430 Mismatch repair
    SPRI_1282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spri03032]
    SPRI_1282
   03400 DNA repair and recombination proteins [BR:spri03400]
    SPRI_1282
Enzymes [BR:spri01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SPRI_1282
    6.5.1.6  DNA ligase (ATP or NAD+)
     SPRI_1282
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SPRI_1282
DNA replication proteins [BR:spri03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SPRI_1282
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SPRI_1282
DNA repair and recombination proteins [BR:spri03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SPRI_1282
   NER (nucleotide excision repair)
    Other NER factors
     SPRI_1282
   MMR (mismatch exicision repair)
    Other MMR factors
     SPRI_1282
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase PNKP_ligase
Motif
Other DBs
NCBI-ProteinID: ALC19588
UniProt: A0A0M4D864
LinkDB All DBs
Position
complement(1508013..1509551)
Genome map
AA seq 512 aa AA seqDB search
MLLARVAEVSREVAATSARSRKIAALADLFAEALPEDVALVISYLAGRVPQGRIGIGWSV
LKESVPPAAVPSLTVGEADAALTALAQVSGPGAQAERRTRVHRLMSAATAEEQEFLVRLL
TGEVRQGALDAVALEAVAKAAGAPSADVRRAVMLEGSLPRVAAALLAGGPAALEEFRLRV
GNPVQPMLAHSAKSVTEAAGTLGAACVVEEKLDGIRVQVHREGSDVRIFTRSLDDITDRL
PEVAQRTREMTGDRFILDGEVIAMAPDGRPVPFQDIASRVGSRLDVEAARTTLPLYPVYF
DVLAADGEPVLDLPGRERHRILARLVPEPTRVRRTVVEDPSDPAQVAAAEEFFTATLDRG
HEGVLVKALDAPYSAGRRGRSWLKVKPVHTLDLVVLAVERGHGRRTGLLSNLHLGARSAD
GGFVMLGKTFKGLTDEMLRRQTDMLRELAVEDDGFTVRVRPELVVEIAYDGLQRSTRYPA
GVALRFARVLRHRPDKSAAEADTIEQVLAAGR
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgcccgcgtcgccgaagtgtcccgtgaggtggccgccacctcggcccgctcg
cgcaagatcgccgcgctggcggacctcttcgcggaggccttgccggaggacgtcgccctg
gtcatctcctacctggccgggcgggtgccccagggccgcatcggcatcgggtggagcgtc
ctcaaggagtccgtgccgcccgccgccgtgccgtccctcaccgtcggcgaggccgacgcc
gcgctcacggcgctcgcccaggtctccggccccggcgcccaggcggaacgccgcacccgc
gtgcaccggctgatgtcggcggccaccgcggaggaacaggagttcctcgtacggctcctc
accggcgaggtccgccagggcgccctggacgccgtcgcgctggaggccgtcgcgaaggcc
gcgggggccccgtcggcggacgtgcgccgcgccgtcatgctggaggggtcactgccccgt
gtcgccgcggcgctgctcgccggcggcccggcggcactcgaagagttccggctgagggtc
ggcaaccccgtgcagcccatgctcgcccacagcgccaaatccgtgacggaggcggccggg
accctcggtgccgcctgcgtggtcgaggagaagctcgacggcatccgcgtgcaggtgcac
cgcgagggttccgatgtccggatcttcaccaggtccctcgacgacatcaccgaccggctc
cccgaagtggcccagcggacacgggagatgacgggcgaccggttcatcctcgacggcgag
gtcatcgcgatggcaccggacggccggcccgtccccttccaggacatcgcctcccgggtg
ggctcgcgcctcgacgtcgaggccgcccgcaccacgttgccgctgtatcccgtgtacttc
gacgtcctcgccgccgacggggagccggtgctcgacctcccgggccgtgaacggcaccgg
atcctcgcccggctcgtccccgaaccgacgcgggtacggcgcacggtcgtcgaggatccg
tccgatcccgcacaggtcgccgccgcggaggagttcttcaccgcgaccctcgaccgcggg
cacgagggtgtcctcgtcaaggcgctggacgcgccgtacagcgccggccgccgcggccgc
tcatggctcaaggtcaagccggtgcacaccctggacctggtggtcctggccgtcgaacgg
ggccacggccggcgcaccggactgctctccaacctgcacctcggcgcccgctccgccgac
ggcggcttcgtgatgctcgggaagaccttcaagggcctcaccgacgagatgctgcgccgg
cagaccgacatgctgcgggaactggccgtcgaggacgacggtttcaccgtgcgcgtccgg
ccggaactggtcgtggagatcgcctacgacgggctccagcggtccacccgctacccggcg
ggcgtcgccctgcggttcgcccgggtgctgcgccaccggccggacaagtccgcagcggag
gccgacacgatcgaacaggtcctggccgcgggccgctga

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