Spiroplasma sp. NBRC 100390: S100390_v1c06780
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Entry
S100390_v1c06780 CDS
T05859
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S100390_v1c06780 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprn03400
]
S100390_v1c06780 (uvrC)
DNA repair and recombination proteins [BR:
sprn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S100390_v1c06780 (uvrC)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APE13485
UniProt:
A0A1J0U134
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Position
complement(773056..774837)
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AA seq
593 aa
AA seq
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MATKLSLKEQVEILPSKPGCYLFFNNYNQVLYVGKAKNLRSRVSSYFNKVYNYKTTRLVQ
EITRLETIITKTEKEALILEHNLIKQYKPKYNILLNDDKHYPYIVITKEEDPQYLYVRNI
HKKYARYYGPFPEGSHAREIIKVLERLYPLRRCKGNLGKPCLYYHINQCSGACFKPVPKE
YYAAMIKKVHAFFKGNFNETKELLEKRMLQAANNLQFEEAQKLKLLIRNLDWTLSSQTVE
MLNQNENLDVISLYQTDHNLVLTTLFYRAGKLSYKDYEYYQVTVEDDYQELYRLYLQNIY
QKNILPTKIIVNEAIALPELNLLFDNRVFHPQTRAEKTIMRLATDNSYESYLQSQSTAQR
QLNNVEVLQELQNLLHLNELPYLIEMIDIANINDEFVTGGVIVYKNGRPSRNDYRKYNLA
IIEQDDAHRIAAVVARRYQKAIETDQPLPNLIIMDGGIQQVNACLNELTKLNLTIPVIGL
VKNDQHKTDHLLNLTKEKVYLNKSSRLFLFLTKIQDDVHHFAISSFRRRQTKALTTSILE
SVPGLGSQRIKALNLHFDSIGAMQKASPDELHQVLRSWKLVENLRKFLENFDK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaagttatcattaaaagaacaagttgaaattttaccatcaaaaccaggatgt
tatttattttttaataattataaccaagtgttatatgttggaaaagcaaaaaatttacga
agtcgggttagttcgtactttaataaagtttataattataaaacaactcgtttggtccaa
gaaattacgcgactagaaacaattattacaaaaacagaaaaagaagctttaattttagaa
cataatttaataaaacaatataaaccaaaatataatattttattaaatgatgataaacat
tatccatatattgttattactaaagaagaagatccccaatatttatatgttcgtaatatt
cataaaaaatatgcccgttattatggcccgtttcccgaaggaagccatgctcgtgaaatt
attaaagttttagaacgattatatccgttacgacgttgtaaaggaaatcttggtaaaccg
tgtttatattatcatattaaccaatgctctggtgcttgttttaagccagttccaaaagaa
tactatgcagcaatgattaaaaaagttcatgctttttttaaaggaaattttaatgaaaca
aaagaacttttagaaaaacgaatgttacaagcagcaaataatttgcaatttgaagaggct
caaaagttaaaattattaattcgtaatttagattgaactttatcgtcacaaacagttgaa
atgctaaatcaaaatgaaaatttagatgtaattagtttatatcaaactgatcataattta
gtgttaacaactttgttttatcgtgctggaaaactaagttataaggattatgaatattat
caagtaacagttgaagatgattatcaagagttatatcggttgtatttgcaaaatatttat
cagaaaaatattttaccgactaagattattgttaatgaagcaattgctttaccagaatta
aatttattatttgataatcgtgtctttcatccccaaacccgagcggaaaaaacaattatg
cggctagcaaccgacaacagttatgagtcttacctgcaatcacaatcaacagctcagcgc
caactaaataatgttgaagttttacaagaattacaaaatcttttacatttaaatgaatta
ccctatttaattgaaatgattgatattgcaaatattaatgatgaatttgtcactggtggg
gtgattgtttataaaaatggtcgcccatcacggaatgattatcgcaaatataatcttgct
attattgaacaagatgatgctcatcggattgctgcggttgttgcacggcgttatcaaaaa
gctattgaaactgaccagccattaccaaatttaattatcatggatgggggaattcaacag
gttaatgcttgtttaaatgaattaacaaaattaaatttaacaatccctgttattggatta
gttaaaaatgatcaacataaaactgatcatcttcttaatttgacaaaagaaaaggtttac
cttaataaaagtagtcgcttatttttatttttaacaaaaatccaagatgatgttcatcat
tttgcaattagtagttttcgtcgtcgacaaacaaaagcattaacaacaagcattttagag
tcagttccaggattgggatcacaacgaattaaagctttaaatcttcattttgatagtatt
ggggcaatgcaaaaagcaagtcctgatgaattacatcaagttttacgtagttgaaaactt
gtcgaaaatctacgaaagtttttggagaattttgataaataa
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