Sphingobacterium psychroaquaticum: E2P86_14630
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Entry
E2P86_14630 CDS
T05967
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03410
Base excision repair
spsc03430
Mismatch repair
spsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2P86_14630 (recJ)
03430 Mismatch repair
E2P86_14630 (recJ)
03440 Homologous recombination
E2P86_14630 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_14630 (recJ)
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E2P86_14630 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E2P86_14630 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E2P86_14630 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QBQ42315
UniProt:
A0A7Z2AID8
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All DBs
Position
3535645..3537339
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AA seq
564 aa
AA seq
DB search
MQKRWVVKPKNEVNKVNTLRDELGISTVIAELLINRGILTFDQAKAFFRPSLDMLHDPFL
MQDMDKAISRIEQAIGNKEKILIYGDYDVDGTTAVSVVYSFFRDFHTGMEFYIPDRYSEG
YGISTQGIDYAAEHGFSLIIALDCGIKANDKIDYAASKNIDFIIGDHHLPGPEIPQAVAV
LDPKRVDCLYPYKELSGCGIGFKIIQAFIQKNDMDIQLAYQYLDLVAVSIASDIVPITGE
NRILTHYGLKKLNTNPNCGLQALINLSSNKTGQFSVNDIVFQIGPRINAAGRIEHAKDAV
KLLISKSLQEAKDFSATVDDQNNLRKDFDLRITEEALDLIDNDEVLIKRKSTVLYKEDWH
KGVIGIVASRLTEKYYRPTIIMTKTNGHIAGSARSVLGFDLYEALSECSDLLDQYGGHKY
AAGLTMPIENLNAFQQRFEDVVSGTIKPEMLQQEVLIETAIKLTDIDSKFYRLLKQFEPY
GPQNEAPIFVSRAVEGSGYIVGSNHIKITIRQGDSPAFECIGFGLSEYIDTINSGASFDV
CYTIEENNWRGKRNLQLNIKAIRF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaggtgggtagtaaagccaaaaaatgaggtcaataaagtgaacacactgaga
gatgaactgggcataagtaccgtcatcgctgagctacttatcaaccgcggcattctcacc
ttcgatcaagcaaaagcattctttcgtccctccttagacatgctgcatgaccccttttta
atgcaggatatggacaaagcgatttcccgtattgaacaggccataggcaacaaagagaaa
atccttatttatggcgattacgatgtagatggtacaacagctgtttccgtcgtctatagt
ttctttcgagacttccacactggtatggaattttatatccctgatcgctatagcgaaggt
tacggaatctctacccaaggaatcgattatgcagcagaacatggcttttctttgattatc
gctttagattgtggtatcaaggcaaatgataaaatcgattacgcagcatcgaaaaacatc
gatttcattatcggagatcaccacttaccagggcccgaaataccacaagccgtagcagta
ttggatccgaaacgtgtggattgtttatacccctacaaggagctgtcgggttgcggaata
ggatttaaaatcatacaagcgtttattcaaaaaaacgatatggatatccagctggcttat
cagtaccttgatctggtagctgtcagtatcgcttcggatattgttccaattacaggagag
aaccgaatattgacccactatgggctcaagaaactgaataccaatcctaactgtggctta
caagcgttaattaatctttcctccaataaaacaggccaattttcagtcaatgatattgtc
ttccaaataggtccccgcatcaatgctgcaggacgaatagaacatgccaaagatgcggta
aaacttctgatttcaaaatcgttgcaagaagcaaaagacttctcggcgacagtcgacgat
caaaacaaccttcgaaaagactttgatctacgcatcacagaagaagctcttgatttaatt
gataacgacgaagtattgattaagcgtaagtctaccgtcctgtataaagaagactggcat
aaaggtgtgatcggtatcgttgcttctcggttaacggagaagtattatcgcccaaccata
attatgaccaaaacaaatgggcatattgcaggttcggcacgctcggtactgggctttgac
ctctacgaggcactgagtgaatgtagcgatttattggatcaatatggtggccacaaatat
gcagcgggattaaccatgcccattgagaatctgaatgcgtttcagcagcgttttgaggat
gtcgtgagtggcaccattaaacccgaaatgctccaacaggaggtcctcattgaaacagct
atcaaattaacagatattgacagtaaattctatcgactgttaaaacaatttgagccgtac
ggcccccagaatgaagctcctattttcgtctcacgagccgtcgaaggttcgggatatatt
gtaggtagtaatcatattaagataacgataagacaaggagactctccagcttttgaatgt
attggctttggattgtctgaatacatagacaccataaacagcggagcctccttcgatgta
tgctacaccattgaggaaaacaactggcgaggaaagagaaacctacaattgaacattaag
gctattcgattttaa
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