Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_00319
Help
Entry
SULPSESMR1_00319 CDS
T04974
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse03030
DNA replication
spse03430
Mismatch repair
spse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SULPSESMR1_00319 (dnaE1)
03430 Mismatch repair
SULPSESMR1_00319 (dnaE1)
03440 Homologous recombination
SULPSESMR1_00319 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spse03032
]
SULPSESMR1_00319 (dnaE1)
03400 DNA repair and recombination proteins [BR:
spse03400
]
SULPSESMR1_00319 (dnaE1)
Enzymes [BR:
spse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SULPSESMR1_00319 (dnaE1)
DNA replication proteins [BR:
spse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SULPSESMR1_00319 (dnaE1)
DNA repair and recombination proteins [BR:
spse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SULPSESMR1_00319 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
E2F_TDP
Motif
Other DBs
NCBI-ProteinID:
ASM71154
UniProt:
A0A221JWP7
LinkDB
All DBs
Position
353986..357501
Genome browser
AA seq
1171 aa
AA seq
DB search
MPHDPRFIHLRTHSEYSLLEGALRLKKLPDLCKKHDMPALALTDTNNMFAALEYSVTLSG
AGIQPIIGCQVDLTWAETRPGDRPRLPAGLVLLAQNETGYENLMKLNSCLYLKGDGQLPQ
VTLDELEALSAGLICLTGGPEGPLGMLLRAGQRPAAQAMMDRLAAAFPQRLYVELQRHPG
PDGQPDAEKLTERPFVEMAYAMDLPLVATNDVYFPATDMYEAHDALICIAEGAYVDQQQD
RRRLTNQHYFKSQSEMVTLFADLPEAVQNTVEIAKRCAFMAYRRDPILPKFADDEVVELR
RQANEGLKARLEVIPHAAPVEDYQKRLDFELDIIEGMGFPGYFLIVADFIKWAKDENIPV
GPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QRKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPVSIAKALI
DEPRLRDEARNEEVVKRLLDYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDQIRGAGRDLHVGADGTQLYEPAPGTQ
NDINAIPLDDEASYKLYAAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLRKRENLHPTIDHILDETQGIIVYQEQVMQIAQDMAGYSLGGADLLRR
AMGKKIQEAMDAERPKFLEGSKANGVDKDKAMEVWNLLDKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVRKAMGLPWVPPCVNRSDAMFKVVDGA
LVYALGALKNVGVEAMKLVTEGRKVDGVDKPFATLFDLARRVDLKRVGKRPLEMLARSGA
FDQLDNNRRRVYDALDALVQYSAAIHDQKNSDQVSLFGEAGDDLPEPRMMPGDDYLPAER
LAEEFKAVGFYLSGHPLDDYAGALKRKGVQTLDEVLADVERRGAKNAKLAGVVAGCQIRK
SAKGNRFAFAQLSDTTGAYEVTLFSEALEKSQDFLVTGAKVIITAEATMESDQLKLLARS
VAPIDAVVADVGGMGLRVYINDAGAIGSIASVLDGATKGTRAIGRGPVQLCLMGAGLNGE
VDVELGDDFPVNPQIKGAIKSLGGVIEVEEI
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgatccccgattcattcacctgcgcacccattccgagtattccctgctggag
ggcgcgttgcggctgaaaaagctgcctgacttgtgcaaaaaacacgatatgcctgcgctg
gcgttgactgacaccaacaacatgttcgcggcgttggaatactctgtcacgctgtcgggg
gcgggaatccagccgatcatcggctgtcaggtcgatctgacatgggccgagacccgcccc
ggtgaccggccgcgcctgcctgcgggccttgtgctgctggcgcagaacgagacgggttac
gagaacctgatgaagctgaactcttgcctgtatcttaagggagacgggcagttaccgcag
gtgacactggacgagcttgaggcgctgtcggcggggctgatctgtctgaccggtgggccc
gaggggccgttgggcatgttgctgcgtgcaggccagcgcccagcagcgcaggcgatgatg
gaccggctggcggcagctttcccgcagcggctgtatgtcgagttgcagcggcatcccggc
cccgacggtcagcccgatgcggaaaagttgaccgagcggccctttgtcgagatggcctat
gcgatggatttgccactggtggccaccaacgatgtgtactttccggccacagatatgtac
gaggcgcatgacgcgctgatctgcattgccgagggagcctatgtcgaccagcagcaggac
cgacgccgtctgaccaaccagcattatttcaaatcgcagtccgagatggtgacgctgttc
gccgatctgcccgaggcggtccagaacactgtcgagattgccaagcgctgcgcctttatg
gcctatcgccgtgatccgatcctgcccaagtttgccgacgacgaagtggtcgaactgcgc
cgtcaggccaacgaaggcctgaaggcgcggttggaggtgatcccgcatgccgcgccggtc
gaagactatcagaagcggctggatttcgaactggatattatcgagggcatggggttcccc
ggttactttctgatcgttgccgattttatcaaatgggccaaggacgagaatattccggtg
ggtccgggccgtgggtcgggtgcgggcagtctggtggcctatgcgctgaccattaccgac
cttgatccgctgcgctatgccttgctgtttgagcggttcctgaaccccgaacgggtcagc
atgcccgactttgacatcgacttttgcatggaccgccgcgaggaagtgatccgctatgtg
caaaggaagtacggccgcgacaaggtggggcagatcatcacctttggtgcgctgctgtcc
aaggcggcagtgcgcgacatcgggcgggtattgcagatgccatatggtcaggtcgaccgg
ttgtcgaaactgatcccggtcgagggggtaaaacctgtcagcatcgccaaagccctgatc
gacgaaccgcgcctgcgcgacgaggcgcgcaatgaagaggtggtcaaacggctgctggat
tacggccagcaggtcgaggggctgttgcgcaacgcatcgacgcacgccgccggtgtggtg
atcggcgaccgtccgctggatgcgctggtgccgctgtaccaggacccgcgttccgacatg
cccgcgacccagttcaacatgaagtgggtggaacaggccggtctggtcaagttcgacttt
ctgggcctgaagaccctgactgtgatccagaatgctgtggaccagatccgtggtgcgggg
cgtgacctgcatgtcggggccgatggcacgcagttatatgagcccgccccgggcacgcag
aatgacatcaacgccatcccgctagatgacgaggcatcgtacaagctttatgctgccgcc
aagaccgtcgccgtgtttcaggtggaatccagcggtatgatggacgcgctcaaacggatg
aagccgacgtgcatcgaggacatcgtggcccttgtggcgctgtaccgtcccggtccgatg
gaaaacatcccgacctattgcgaggtcaagaatggcctgcgcaaacgcgaaaacctgcac
ccgacgatcgaccatattctcgatgagacccaaggcatcatcgtctatcaggaacaggtg
atgcagatcgcgcaggacatggcgggatacagtcttggcggtgccgacctgctgcgccgt
gcgatgggtaagaaaattcaggaagcgatggacgcagagcggcccaagtttctggaaggg
tccaaagccaacggtgtggacaaggacaaggcgatggaggtctggaaccttctcgacaag
ttcgccaactatggtttcaacaaatcccacgctgccgcctatgcggtggtcagctatcag
actgcatggctgaaggcgaaccatccggtcgagtttatggccggtgtgatgaactgcgat
atccacttgaccgacaaactggcgatttatttcgaagaggtccgcaaggcgatgggcctg
ccatgggtgccgccttgtgtgaaccgctcggatgcgatgttcaaggtagtcgatggcgcg
ctggtctatgcgctgggtgccttgaagaacgtgggcgtcgaggcgatgaaactggtcacc
gaaggccgcaaggtggatggagtggacaaaccctttgcaacgctgttcgatctggctcga
cgggttgatctgaaacgggtgggcaaacgcccgttggagatgctggcccgttctggggct
tttgaccaactcgataacaaccgccgcagggtgtatgatgcgctggacgctctggtgcaa
tattccgcagccatccacgaccagaagaactcggatcaggtgtcgctgttcggcgaggct
ggcgacgatctgcccgaaccgcggatgatgccgggcgatgattatctgcccgctgaacgt
ctggccgaagagttcaaggccgtgggcttttatctgtccggccacccgctggacgactat
gccggcgcgctgaaacgcaagggcgtgcagacactggatgaggtgcttgccgatgtcgaa
cggcgcggggcaaagaatgccaaactggcgggcgtggttgcggggtgtcagatccgcaaa
tcggccaagggcaaccgctttgcttttgcccagttgtcggacaccacaggtgcctacgag
gtcaccctgttctcggaagcgctggagaaatctcaggactttctggtgaccggggccaag
gtgatcatcaccgccgaagcaacgatggagagcgatcagcttaagctgctggcgcgttcc
gtggcaccgattgatgccgtggtggccgatgtgggtggcatgggcctgcgcgtgtacatc
aacgacgcgggggctatcggctcgatcgcatcggtgctggacggtgcgacaaaaggcacg
cgcgcgatcggacgcggaccggtccagttgtgcctgatgggcgcggggctgaacggcgag
gtcgatgtcgaactgggcgatgacttccccgtaaacccgcagatcaagggcgcgataaaa
agtctgggcggcgtgatagaagtcgaggaaatctag
DBGET
integrated database retrieval system