KEGG   Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_00319
Entry
SULPSESMR1_00319  CDS       T04974                                 
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
spse  Pseudosulfitobacter pseudonitzschiae
Pathway
spse03030  DNA replication
spse03430  Mismatch repair
spse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SULPSESMR1_00319 (dnaE1)
   03430 Mismatch repair
    SULPSESMR1_00319 (dnaE1)
   03440 Homologous recombination
    SULPSESMR1_00319 (dnaE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spse03032]
    SULPSESMR1_00319 (dnaE1)
   03400 DNA repair and recombination proteins [BR:spse03400]
    SULPSESMR1_00319 (dnaE1)
Enzymes [BR:spse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SULPSESMR1_00319 (dnaE1)
DNA replication proteins [BR:spse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SULPSESMR1_00319 (dnaE1)
DNA repair and recombination proteins [BR:spse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SULPSESMR1_00319 (dnaE1)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon E2F_TDP
Other DBs
NCBI-ProteinID: ASM71154
UniProt: A0A221JWP7
LinkDB
Position
353986..357501
AA seq 1171 aa
MPHDPRFIHLRTHSEYSLLEGALRLKKLPDLCKKHDMPALALTDTNNMFAALEYSVTLSG
AGIQPIIGCQVDLTWAETRPGDRPRLPAGLVLLAQNETGYENLMKLNSCLYLKGDGQLPQ
VTLDELEALSAGLICLTGGPEGPLGMLLRAGQRPAAQAMMDRLAAAFPQRLYVELQRHPG
PDGQPDAEKLTERPFVEMAYAMDLPLVATNDVYFPATDMYEAHDALICIAEGAYVDQQQD
RRRLTNQHYFKSQSEMVTLFADLPEAVQNTVEIAKRCAFMAYRRDPILPKFADDEVVELR
RQANEGLKARLEVIPHAAPVEDYQKRLDFELDIIEGMGFPGYFLIVADFIKWAKDENIPV
GPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QRKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPVSIAKALI
DEPRLRDEARNEEVVKRLLDYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDQIRGAGRDLHVGADGTQLYEPAPGTQ
NDINAIPLDDEASYKLYAAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLRKRENLHPTIDHILDETQGIIVYQEQVMQIAQDMAGYSLGGADLLRR
AMGKKIQEAMDAERPKFLEGSKANGVDKDKAMEVWNLLDKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVRKAMGLPWVPPCVNRSDAMFKVVDGA
LVYALGALKNVGVEAMKLVTEGRKVDGVDKPFATLFDLARRVDLKRVGKRPLEMLARSGA
FDQLDNNRRRVYDALDALVQYSAAIHDQKNSDQVSLFGEAGDDLPEPRMMPGDDYLPAER
LAEEFKAVGFYLSGHPLDDYAGALKRKGVQTLDEVLADVERRGAKNAKLAGVVAGCQIRK
SAKGNRFAFAQLSDTTGAYEVTLFSEALEKSQDFLVTGAKVIITAEATMESDQLKLLARS
VAPIDAVVADVGGMGLRVYINDAGAIGSIASVLDGATKGTRAIGRGPVQLCLMGAGLNGE
VDVELGDDFPVNPQIKGAIKSLGGVIEVEEI
NT seq 3516 nt   +upstreamnt  +downstreamnt
atgccccatgatccccgattcattcacctgcgcacccattccgagtattccctgctggag
ggcgcgttgcggctgaaaaagctgcctgacttgtgcaaaaaacacgatatgcctgcgctg
gcgttgactgacaccaacaacatgttcgcggcgttggaatactctgtcacgctgtcgggg
gcgggaatccagccgatcatcggctgtcaggtcgatctgacatgggccgagacccgcccc
ggtgaccggccgcgcctgcctgcgggccttgtgctgctggcgcagaacgagacgggttac
gagaacctgatgaagctgaactcttgcctgtatcttaagggagacgggcagttaccgcag
gtgacactggacgagcttgaggcgctgtcggcggggctgatctgtctgaccggtgggccc
gaggggccgttgggcatgttgctgcgtgcaggccagcgcccagcagcgcaggcgatgatg
gaccggctggcggcagctttcccgcagcggctgtatgtcgagttgcagcggcatcccggc
cccgacggtcagcccgatgcggaaaagttgaccgagcggccctttgtcgagatggcctat
gcgatggatttgccactggtggccaccaacgatgtgtactttccggccacagatatgtac
gaggcgcatgacgcgctgatctgcattgccgagggagcctatgtcgaccagcagcaggac
cgacgccgtctgaccaaccagcattatttcaaatcgcagtccgagatggtgacgctgttc
gccgatctgcccgaggcggtccagaacactgtcgagattgccaagcgctgcgcctttatg
gcctatcgccgtgatccgatcctgcccaagtttgccgacgacgaagtggtcgaactgcgc
cgtcaggccaacgaaggcctgaaggcgcggttggaggtgatcccgcatgccgcgccggtc
gaagactatcagaagcggctggatttcgaactggatattatcgagggcatggggttcccc
ggttactttctgatcgttgccgattttatcaaatgggccaaggacgagaatattccggtg
ggtccgggccgtgggtcgggtgcgggcagtctggtggcctatgcgctgaccattaccgac
cttgatccgctgcgctatgccttgctgtttgagcggttcctgaaccccgaacgggtcagc
atgcccgactttgacatcgacttttgcatggaccgccgcgaggaagtgatccgctatgtg
caaaggaagtacggccgcgacaaggtggggcagatcatcacctttggtgcgctgctgtcc
aaggcggcagtgcgcgacatcgggcgggtattgcagatgccatatggtcaggtcgaccgg
ttgtcgaaactgatcccggtcgagggggtaaaacctgtcagcatcgccaaagccctgatc
gacgaaccgcgcctgcgcgacgaggcgcgcaatgaagaggtggtcaaacggctgctggat
tacggccagcaggtcgaggggctgttgcgcaacgcatcgacgcacgccgccggtgtggtg
atcggcgaccgtccgctggatgcgctggtgccgctgtaccaggacccgcgttccgacatg
cccgcgacccagttcaacatgaagtgggtggaacaggccggtctggtcaagttcgacttt
ctgggcctgaagaccctgactgtgatccagaatgctgtggaccagatccgtggtgcgggg
cgtgacctgcatgtcggggccgatggcacgcagttatatgagcccgccccgggcacgcag
aatgacatcaacgccatcccgctagatgacgaggcatcgtacaagctttatgctgccgcc
aagaccgtcgccgtgtttcaggtggaatccagcggtatgatggacgcgctcaaacggatg
aagccgacgtgcatcgaggacatcgtggcccttgtggcgctgtaccgtcccggtccgatg
gaaaacatcccgacctattgcgaggtcaagaatggcctgcgcaaacgcgaaaacctgcac
ccgacgatcgaccatattctcgatgagacccaaggcatcatcgtctatcaggaacaggtg
atgcagatcgcgcaggacatggcgggatacagtcttggcggtgccgacctgctgcgccgt
gcgatgggtaagaaaattcaggaagcgatggacgcagagcggcccaagtttctggaaggg
tccaaagccaacggtgtggacaaggacaaggcgatggaggtctggaaccttctcgacaag
ttcgccaactatggtttcaacaaatcccacgctgccgcctatgcggtggtcagctatcag
actgcatggctgaaggcgaaccatccggtcgagtttatggccggtgtgatgaactgcgat
atccacttgaccgacaaactggcgatttatttcgaagaggtccgcaaggcgatgggcctg
ccatgggtgccgccttgtgtgaaccgctcggatgcgatgttcaaggtagtcgatggcgcg
ctggtctatgcgctgggtgccttgaagaacgtgggcgtcgaggcgatgaaactggtcacc
gaaggccgcaaggtggatggagtggacaaaccctttgcaacgctgttcgatctggctcga
cgggttgatctgaaacgggtgggcaaacgcccgttggagatgctggcccgttctggggct
tttgaccaactcgataacaaccgccgcagggtgtatgatgcgctggacgctctggtgcaa
tattccgcagccatccacgaccagaagaactcggatcaggtgtcgctgttcggcgaggct
ggcgacgatctgcccgaaccgcggatgatgccgggcgatgattatctgcccgctgaacgt
ctggccgaagagttcaaggccgtgggcttttatctgtccggccacccgctggacgactat
gccggcgcgctgaaacgcaagggcgtgcagacactggatgaggtgcttgccgatgtcgaa
cggcgcggggcaaagaatgccaaactggcgggcgtggttgcggggtgtcagatccgcaaa
tcggccaagggcaaccgctttgcttttgcccagttgtcggacaccacaggtgcctacgag
gtcaccctgttctcggaagcgctggagaaatctcaggactttctggtgaccggggccaag
gtgatcatcaccgccgaagcaacgatggagagcgatcagcttaagctgctggcgcgttcc
gtggcaccgattgatgccgtggtggccgatgtgggtggcatgggcctgcgcgtgtacatc
aacgacgcgggggctatcggctcgatcgcatcggtgctggacggtgcgacaaaaggcacg
cgcgcgatcggacgcggaccggtccagttgtgcctgatgggcgcggggctgaacggcgag
gtcgatgtcgaactgggcgatgacttccccgtaaacccgcagatcaagggcgcgataaaa
agtctgggcggcgtgatagaagtcgaggaaatctag

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