Shewanella psychrophila: Sps_00560
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Entry
Sps_00560 CDS
T05063
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sps_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsw03016
]
Sps_00560
Enzymes [BR:
spsw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Sps_00560
Transfer RNA biogenesis [BR:
spsw03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Sps_00560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
AQS35758
UniProt:
A0A1S6HJS9
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All DBs
Position
complement(590673..591803)
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AA seq
376 aa
AA seq
DB search
MASIEPTANNNKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYCAAADD
LKDAQAVCDKLGIKLHTVNFASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFKAFLEF
ADEILDADYIAMGHYVRRSDNTGQSQMLRGIDGNKDQSYFLYTLSHEQISRSLFPVGELD
KSEVREIAKEMGLITHDKKDSTGICFIGERKFTDFLSTFLPAQPGNIETSEGDVIGKHQG
LMYHTLGQRKGLGIGGMKNSNDDPWYVVDKEMDRNVLIVGQGGTHPRLMSVGFYADQLHW
VDRKGPINGAKITVKTRYRQHDVACTLFLETNDKGEDTIRVLFDEPVAAVTPGQSAVFYS
GELCLGGGIIDSLIRD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatcgaacccactgcaaataacaataaaaaagtcattgtcggcatgtccggc
ggtgtcgactcatctgtctcggcttacttgctactcaagcaaggttatcaggtcgaagga
cttttcatgaaaaactgggaagaagatgatactgatgaatattgtgctgctgccgatgat
ctaaaagatgctcaagctgtatgtgacaagcttgggatcaagctgcatacagtgaacttc
gcctccgagtattgggacaatgtgttcgaatatttcttggcagaatacaaggcaggccgt
acacccaatcctgatatcatctgtaacaaagagattaagttcaaagcttttctcgaattc
gccgatgaaattctagacgctgattacattgccatggggcattatgtacgtcgcagcgat
aacacaggccaaagccaaatgttacgtggcatcgatggcaataaagatcaaagttacttc
ctctatacactcagtcatgagcaaatatcccgttctcttttccctgttggcgagctcgac
aagagtgaagtcagagaaatagccaaagagatgggccttatcacccatgataagaaagac
agtaccggaatttgttttatcggcgagcgtaagtttaccgactttttaagcaccttctta
cccgcccagcccggtaatattgagacctcagaaggcgacgttatcggcaagcatcagggg
ctcatgtaccacaccttaggtcaacgtaagggtctgggtattggcggaatgaagaacagc
aatgacgatccttggtatgtagtagataaggaaatggacagaaatgtcttaatcgttggc
caaggtggcactcacccaagattaatgtccgtgggcttctacgctgaccagctacactgg
gtcgacagaaaagggccaatcaatggcgcaaaaatcacagtaaagacccgctaccgtcaa
cacgacgtggcttgtaccctgttcctcgaaaccaatgataaaggcgaagacacaatcaga
gtcctgtttgatgaacctgttgcggctgtaaccccaggtcaatcggcggtcttctattct
ggtgaactctgcttaggcggcggcatcatcgactcattaatcagagattaa
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