Shewanella psychrophila: Sps_03308
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Entry
Sps_03308 CDS
T05063
Name
(GenBank) RNAse PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsw03016
]
Sps_03308
Enzymes [BR:
spsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
Sps_03308
Transfer RNA biogenesis [BR:
spsw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Sps_03308
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AQS38444
UniProt:
A0A1S6HSI2
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All DBs
Position
complement(3804404..3805117)
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AA seq
237 aa
AA seq
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MRPSDRTPAQSRPVTITRQFTAHAEGSVLVEFGDTKVLCTASFEEGVPRFLKGKGQGWVT
AEYGMLPRSTHSRMNREAARGKQSGRTQEIQRLIGRSLRAAVDMKALGENTIVIDCDVIQ
ADGGTRTAAITGACVALVDSLNWARGKGILKTNPLKFLIAAVSVGIYKGEPICDLEYLED
SEAETDMNVVMTETGKMIEVQGTAEGEPFSHEELLSMLELAKHGIREIVDVQKAALS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctagtgatagaacgccagctcaatctcgtccagtgacaatcactcgccaattt
accgctcatgctgaaggttctgttttagtcgagtttggtgatactaaagtactctgtact
gcgagcttcgaagagggtgtccctcgtttccttaagggaaaaggtcaaggttgggttacc
gctgaatacggcatgttgccacgttctactcatagccgcatgaatcgtgaggcggctcgt
ggtaagcagtctggccgtacacaggagatccaacgccttatcggtcgctcattgcgtgca
gctgtcgatatgaaagcattaggtgagaacactatcgtcatcgattgtgatgttattcag
gccgatggtggtacacgtactgctgcgattactggtgcctgtgttgctttggttgattca
ttaaactgggcgcgtggcaaaggtattttaaagacaaacccacttaagttccttatcgct
gcagtcagtgttggtatttataaaggtgagccaatctgtgatttagagtatttggaagac
agcgaagctgaaaccgatatgaacgtagtgatgacagaaaccggtaagatgatcgaagtc
caaggcactgccgaaggtgagccatttagccatgaagagttgcttagtatgctagagctg
gctaagcacggcattcgtgaaatagtcgatgtacagaaagcggcattgagctaa
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