Shewanella psychrophila: Sps_03787
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Entry
Sps_03787 CDS
T05063
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
spsw
Shewanella psychrophila
Pathway
spsw02020
Two-component system
spsw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sps_03787
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sps_03787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsw03000
]
Sps_03787
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spsw02035
]
Sps_03787
Transcription factors [BR:
spsw03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sps_03787
Bacterial motility proteins [BR:
spsw02035
]
Flagellar system
Flagellar assembly proteins
Others
Sps_03787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_50
Mg_chelatase
AAA
bpMoxR
AAA_7
PAGK
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQS38904
UniProt:
A0A1S6HTU0
LinkDB
All DBs
Position
complement(4328198..4329631)
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AA seq
477 aa
AA seq
DB search
MMQTDQRILLVGNQSERMNRLSCVFEFLGEQVELVAIDKLELRLQSTRYRALVIAADSQS
KELFQSLAGKLPWQPILLLGEQDGVNASNILGYVEEPLNYPQLTELLHFCQVFGQVRRPE
TPTSVNQTKLFRSMVGRSEGIAQVRHLIGQVASSDATVLVLGQSGTGKEVVARNIHYISD
RRDGPFIPVNCGAIPAELLESELFGHEKGSFTGAISARKGRFELAEKGTLFLDEIGDMPL
QMQVKLLRVLQERVFERVGGSKPIKADVRVVAATHRDLEVMISEGAFREDLYYRLNVFPI
EMPALCERKDDIPLLLQELVSRVYNEGRGKVRFTQRAIESLKEHQWAGNVRELSNLVERL
TILYPGGLVDVNDLPHKYRHIDVPEYCVEVSEEELERDALAAIFSDEESIEIPETRFPSE
LPPEGVNLKDLLAELEIDMIRQALEQQDNVVARAAEMLGIRRTTLVEKMRKYGMGKD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaacagatcaacgaattctacttgtcggtaatcagtctgagcgaatgaatcgc
ttatcatgtgtatttgagtttttgggtgagcaagttgagttagtcgcaatcgataaactt
gaactgcgactacaaagtactcgttaccgggccttggttatcgctgctgactcacagtct
aaagagttatttcaatcccttgccgggaaattgccttggcagccgattttactgctaggc
gagcaggacggcgtaaatgcctccaatatacttggctatgttgaagaacccctaaattac
cctcaattaactgaattactgcacttctgtcaggtttttggtcaggtgaggcgtcctgaa
actcctaccagtgttaatcaaactaagctttttagaagcatggttggtcgaagtgaaggg
attgcacaagtcaggcatttgattgggcaagtagcctcttctgacgctactgtcttagtg
ctgggtcagtccggtactggtaaagaggttgttgcaagaaatattcattatatttctgat
agacgcgatggccccttcattccggttaactgtggtgcaattcccgctgagcttttagag
agtgaacttttcggccatgagaagggctcatttaccggtgctatcagtgccagaaagggt
cgctttgagcttgctgaaaagggaaccctctttttagatgaaattggcgatatgccattg
cagatgcaggttaaactccttcgtgtactccaagagcgagtgtttgaacgtgttggaggc
agtaaacctattaaggccgatgttcgtgttgtagcggcgacccacagagacttagaggta
atgatctccgaaggggcatttagggaagatctctattaccgattaaatgtattccccata
gaaatgcctgcattatgtgaaagaaaagatgatatacccttacttttacaagagctggtg
agccgggtctacaatgaaggccgtggcaaggtaaggtttactcagcgagctatcgagtcc
ctgaaagagcatcaatgggccgggaatgtcagagagctttccaacttagtcgagcgactt
actattctttaccctggtggcttagtcgatgttaatgatttaccccacaagtatcgtcat
attgatgtgccagaatactgtgtagaggtcagtgaggaggagctagaacgtgatgcctta
gctgcaatcttcagtgatgaagagtccatagagatccccgaaactcgttttccaagtgaa
cttcctcctgaaggggttaacttgaaagatcttcttgctgagcttgagatagatatgatc
aggcaggcactcgagcagcaagataatgttgttgcccgcgcagcagaaatgttggggatc
aggcgtacaaccttagtcgagaaaatgcgtaagtacggtatgggtaaggattaa
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