Shewanella psychrophila: Sps_04149
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Entry
Sps_04149 CDS
T05063
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spsw
Shewanella psychrophila
Pathway
spsw01501
beta-Lactam resistance
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sps_04149
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_04149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsw03036
]
Sps_04149
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_04149
01504 Antimicrobial resistance genes [BR:
spsw01504
]
Sps_04149
Chromosome and associated proteins [BR:
spsw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sps_04149
Transporters [BR:
spsw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sps_04149
Antimicrobial resistance genes [BR:
spsw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sps_04149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF5801
Motif
Other DBs
NCBI-ProteinID:
AQS39255
UniProt:
A0A1S6HUM9
LinkDB
All DBs
Position
4718738..4719910
Genome browser
AA seq
390 aa
AA seq
DB search
MWQIVKIASFISMALWIAACGKNNNAEKSHDPENTEVSVIKVKSQVLDIQVELPGRSKAF
LEAEVKPQASGIIIQRSFIEGSNVKKGQSLYQIDSATYKARLLSVEAELASAKANLILAK
ATVTRYKVLIKTNVESLEKLDEKIAAYKVALAKVVVAKAAVNTAKINLVYSEVKAPISGR
IGKSNVTVGALVSADNPKNLARIQQLDPINVDIAQSSAQLLRLKAKLKQGQLQATNNANV
QLILEDGTAYGYSGVLQFSEVSVDENTGSVTLRAKFPNPNGLLLPGMYVRAVLNAGTDLQ
AILIPQEALTRNTKGQAVVMLVDSESRVESRVVTTAEVIDHQWRITHGLNVGDTLIVEGL
QMIHPGDPVKPIAASSDQSANILASQSANQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaatagtgaaaattgcctcttttattagcatggcgttatggatagcagcctgt
gggaaaaataataatgcagagaagagccatgatcctgaaaatacggaagtcagtgttatt
aaagttaagagtcaagttctggatattcaagtcgaattgccaggccgtagtaaggctttc
cttgaggctgaagtcaaacctcaagcctcgggtattatcattcagcgtagcttcatcgaa
ggcagtaatgttaagaagggtcagtctctatatcaaatagattcggccacatataaagct
agattactcagcgttgaagcagaactggccagtgccaaagcgaatctgattttagcgaaa
gcgactgtgactcgttataaggtgctgattaaaactaatgtcgagagtctagaaaagtta
gatgagaaaattgcggcttataaagtagcgctggcaaaagttgtagtggctaaagcagct
gttaatacagccaaaattaatttggtctattcagaagtgaaggcacctatctcaggtagg
atcggtaaatcgaatgtcacagtgggggcgttggtctcagctgataatccaaaaaaccta
gcaaggattcaacagttagaccccatcaatgtggatatagcacaatccagtgcgcagtta
ttgcgtctaaaagccaagcttaaacaaggtcaattacaggcaaccaataatgccaatgtg
cagctgattcttgaagatggtacagcctatggttattcaggtgtattgcaattttccgag
gtgagtgtcgatgagaataccggctcagttaccttaagagccaaattccccaaccccaat
ggtttattattgccgggtatgtacgtgcgtgcagttctcaatgccggtaccgatctacaa
gcgattctgatcccccaggaagccctcactcgcaacaccaagggccaggccgtcgttatg
ttagtcgatagtgaaagcagggtcgaatctcgagttgtgaccacagctgaggtgatcgat
catcaatggcgtatcacacatggtcttaacgtcggggacacccttatcgtcgaaggattg
caaatgattcatcccggcgatccagttaagcctatagcagcctcttctgatcaatccgca
aatatactcgccagtcaatcggctaaccagtaa
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