Strongylocentrotus purpuratus (purple sea urchin): 578976
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Entry
578976 CDS
T01019
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spu03016
]
578976
Enzymes [BR:
spu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
578976
Transfer RNA biogenesis [BR:
spu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
578976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
578976
NCBI-ProteinID:
XP_784204
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MPSMTLTKPRKKRCVHQPEEAPFPIPIETITNKPATNRNWFFYQAQMIDNNVIVQNEGDI
VFLSKMGFFGKGILSRSKPEHQFFASSFQGSQRRNLPPKERRFQQQRFQQVRQHKYERHL
SWQKQLSLQRSRRDHGEVKEPPTTLISEDSMQNPSYRVPTVPAKRVKRATISERNQRAGI
MTTTDHKKELPAPWLVPESKDLSVDSSQPGRDGQRMASEDAIVPSTHQAHHGPTMQIPTL
APSRDGWETADVDGNGRIKSPRSHSGEDVESRQEVSCRLPGVDHLRGTDDSEASKFVFQS
ETSGVRHTVSSSEPTSSCLPNSVSGKSSQRGDASEKMLSSGQSESVWETRHADWANCMEG
RREGDAGQDETKNHKGLLDSSRNRTSVWSMSSWRTDPKDWDQDQDGESKLRAQFQSGQRQ
EGISNRENTGPSQTMESESVHNGGQDGVTDGAPMTSGLGMDQTSIEGEKKRSSGHLSWSE
EWTSNPRDWDMGDEDQALISTTLDQVHKDSEEEDQGFDDSCEVSEQQSDQMEPSTSKKSL
ESNKAPERDTDCNPSNAEDSFVAVPTLVEFEDATTSQTESNNILSLKGRDARKKIREVNK
GPVRHKDPYPIFEYLQLSYEEAFFLSYGLGCLSLRNANEEQMDLTEMWKTFRRHQPSFVA
NYIVYHFFRSKGWVPKTGLKFGADFILYKKGPPFYHASYCVYVFMINEEDIDHQGIHKMN
WASLMGRDRVIENAAKELMFCFVIKPSKLLQKDLDSPACIPHFKVQEMVMKRWVPSRGRH
QEPLEEELS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatgacgctcaccaagcctcgcaagaagcgatgcgttcaccagccagaagaa
gccccgttccccatcccgattgagacgatcacgaacaagccagctaccaaccgcaattgg
ttcttctatcaagcccagatgattgataataatgtcatcgttcagaatgagggagacatt
gtgtttctgagtaagatgggtttcttcgggaaagggattctatcacggagtaaaccagaa
catcagttctttgcctcttctttccagggatcacaaaggagaaacttacccccgaaagag
cgaagatttcaacagcagagattccagcaagtacgtcagcacaaatacgagaggcatctt
tcatggcagaagcaactctcattacagcgaagtcgtcgtgatcatggagaggtaaaagaa
cccccgactaccttgatcagtgaggactcgatgcagaatccatcctacagggtgcccacc
gtaccggccaaacgagtgaagcgcgccaccatctctgagcgtaaccagcgagcagggatc
atgacgaccaccgaccataagaaggagctgccagcaccgtggttggtcccagagagcaag
gatttatcggtggattctagccagcctggaagagatggtcagaggatggcctcagaggat
gccattgtaccctctacccaccaggcacatcatggacctacgatgcaaataccaacgtta
gcaccgtccagagatgggtgggagactgcggatgtggacgggaacggtagaatcaaatca
cctaggagtcattctggagaggatgttgagagcagacaagaggtttcttgtcgtcttcct
ggtgtggatcatcttcgtggtacggatgactctgaagcgagtaagtttgtcttccaatcc
gagacttccggtgtgcggcacaccgtcagctctagtgaaccaacctcatcttgccttccg
aattcagtctctggtaaaagcagtcaacgtggtgatgccagtgagaagatgttatcatcg
ggacaatctgagtcagtctgggaaaccagacatgcagactgggctaactgcatggaagga
aggagggagggagatgcaggacaggacgagacaaagaatcacaaaggtctgcttgacagt
tccaggaacagaacaagtgtctggtctatgtcttcttggaggacagaccctaaagattgg
gatcaagatcaagacggcgagagcaaattgagagcccagttccaatcgggacaaaggcaa
gaggggattagtaaccgggagaacaccggaccttctcaaacgatggaatcagagtctgtc
cacaatggtgggcaggatggagtaacagatggagctccaatgacttcagggttaggaatg
gatcaaacgtccatcgagggtgagaagaagaggtcgagtggacacctctcttggagcgag
gaatggaccagcaatcctagggactgggatatgggcgatgaggaccaggccctgatttct
acaaccctggaccaggtccacaaggactctgaggaagaagaccaggggtttgatgatagc
tgtgaagtctctgaacagcagagtgatcaaatggagccttccacttcaaagaagtccctc
gagtctaataaggccccggaaagagacactgattgtaaccctagcaatgctgaggattcc
tttgtcgctgtgcctactctggtggagtttgaagatgccaccacaagccagacggagagc
aataacatcctaagtctcaaaggcagagatgcacgcaagaagatccgtgaagtaaacaaa
ggtcctgttagacacaaggacccgtatccaatctttgaatatcttcagctcagctatgag
gaggccttcttcttgtcctacggtcttggatgtttgagcctgagaaacgccaatgaggaa
caaatggatcttacggagatgtggaagactttccggcgccatcagccaagcttcgtggct
aactacattgtatatcacttcttccgaagcaagggatgggtgcccaagacggggctcaag
tttggagcagattttatcctatacaagaagggtccacctttctaccatgccagctactgt
gtgtatgtcttcatgatcaatgaggaggacatcgaccaccaaggcatccacaagatgaac
tgggcctctcttatgggcagggacagggtcattgagaatgctgccaaggagttgatgttc
tgctttgttatcaagcccagtaagctcctgcagaaggacctagattcaccggcctgcatc
ccgcacttcaaggtccaggagatggtgatgaagagatgggttccatcccggggacgacac
caagaaccgcttgaggaagaactctcctag
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