KEGG   Strongylocentrotus purpuratus (purple sea urchin): 578976
Entry
578976            CDS       T01019                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:spu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spu03016]
    578976
Enzymes [BR:spu01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     578976
Transfer RNA biogenesis [BR:spu03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    578976
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 578976
NCBI-ProteinID: XP_784204
LinkDB
Position
Unknown
AA seq 789 aa
MPSMTLTKPRKKRCVHQPEEAPFPIPIETITNKPATNRNWFFYQAQMIDNNVIVQNEGDI
VFLSKMGFFGKGILSRSKPEHQFFASSFQGSQRRNLPPKERRFQQQRFQQVRQHKYERHL
SWQKQLSLQRSRRDHGEVKEPPTTLISEDSMQNPSYRVPTVPAKRVKRATISERNQRAGI
MTTTDHKKELPAPWLVPESKDLSVDSSQPGRDGQRMASEDAIVPSTHQAHHGPTMQIPTL
APSRDGWETADVDGNGRIKSPRSHSGEDVESRQEVSCRLPGVDHLRGTDDSEASKFVFQS
ETSGVRHTVSSSEPTSSCLPNSVSGKSSQRGDASEKMLSSGQSESVWETRHADWANCMEG
RREGDAGQDETKNHKGLLDSSRNRTSVWSMSSWRTDPKDWDQDQDGESKLRAQFQSGQRQ
EGISNRENTGPSQTMESESVHNGGQDGVTDGAPMTSGLGMDQTSIEGEKKRSSGHLSWSE
EWTSNPRDWDMGDEDQALISTTLDQVHKDSEEEDQGFDDSCEVSEQQSDQMEPSTSKKSL
ESNKAPERDTDCNPSNAEDSFVAVPTLVEFEDATTSQTESNNILSLKGRDARKKIREVNK
GPVRHKDPYPIFEYLQLSYEEAFFLSYGLGCLSLRNANEEQMDLTEMWKTFRRHQPSFVA
NYIVYHFFRSKGWVPKTGLKFGADFILYKKGPPFYHASYCVYVFMINEEDIDHQGIHKMN
WASLMGRDRVIENAAKELMFCFVIKPSKLLQKDLDSPACIPHFKVQEMVMKRWVPSRGRH
QEPLEEELS
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgccttcgatgacgctcaccaagcctcgcaagaagcgatgcgttcaccagccagaagaa
gccccgttccccatcccgattgagacgatcacgaacaagccagctaccaaccgcaattgg
ttcttctatcaagcccagatgattgataataatgtcatcgttcagaatgagggagacatt
gtgtttctgagtaagatgggtttcttcgggaaagggattctatcacggagtaaaccagaa
catcagttctttgcctcttctttccagggatcacaaaggagaaacttacccccgaaagag
cgaagatttcaacagcagagattccagcaagtacgtcagcacaaatacgagaggcatctt
tcatggcagaagcaactctcattacagcgaagtcgtcgtgatcatggagaggtaaaagaa
cccccgactaccttgatcagtgaggactcgatgcagaatccatcctacagggtgcccacc
gtaccggccaaacgagtgaagcgcgccaccatctctgagcgtaaccagcgagcagggatc
atgacgaccaccgaccataagaaggagctgccagcaccgtggttggtcccagagagcaag
gatttatcggtggattctagccagcctggaagagatggtcagaggatggcctcagaggat
gccattgtaccctctacccaccaggcacatcatggacctacgatgcaaataccaacgtta
gcaccgtccagagatgggtgggagactgcggatgtggacgggaacggtagaatcaaatca
cctaggagtcattctggagaggatgttgagagcagacaagaggtttcttgtcgtcttcct
ggtgtggatcatcttcgtggtacggatgactctgaagcgagtaagtttgtcttccaatcc
gagacttccggtgtgcggcacaccgtcagctctagtgaaccaacctcatcttgccttccg
aattcagtctctggtaaaagcagtcaacgtggtgatgccagtgagaagatgttatcatcg
ggacaatctgagtcagtctgggaaaccagacatgcagactgggctaactgcatggaagga
aggagggagggagatgcaggacaggacgagacaaagaatcacaaaggtctgcttgacagt
tccaggaacagaacaagtgtctggtctatgtcttcttggaggacagaccctaaagattgg
gatcaagatcaagacggcgagagcaaattgagagcccagttccaatcgggacaaaggcaa
gaggggattagtaaccgggagaacaccggaccttctcaaacgatggaatcagagtctgtc
cacaatggtgggcaggatggagtaacagatggagctccaatgacttcagggttaggaatg
gatcaaacgtccatcgagggtgagaagaagaggtcgagtggacacctctcttggagcgag
gaatggaccagcaatcctagggactgggatatgggcgatgaggaccaggccctgatttct
acaaccctggaccaggtccacaaggactctgaggaagaagaccaggggtttgatgatagc
tgtgaagtctctgaacagcagagtgatcaaatggagccttccacttcaaagaagtccctc
gagtctaataaggccccggaaagagacactgattgtaaccctagcaatgctgaggattcc
tttgtcgctgtgcctactctggtggagtttgaagatgccaccacaagccagacggagagc
aataacatcctaagtctcaaaggcagagatgcacgcaagaagatccgtgaagtaaacaaa
ggtcctgttagacacaaggacccgtatccaatctttgaatatcttcagctcagctatgag
gaggccttcttcttgtcctacggtcttggatgtttgagcctgagaaacgccaatgaggaa
caaatggatcttacggagatgtggaagactttccggcgccatcagccaagcttcgtggct
aactacattgtatatcacttcttccgaagcaagggatgggtgcccaagacggggctcaag
tttggagcagattttatcctatacaagaagggtccacctttctaccatgccagctactgt
gtgtatgtcttcatgatcaatgaggaggacatcgaccaccaaggcatccacaagatgaac
tgggcctctcttatgggcagggacagggtcattgagaatgctgccaaggagttgatgttc
tgctttgttatcaagcccagtaagctcctgcagaaggacctagattcaccggcctgcatc
ccgcacttcaaggtccaggagatggtgatgaagagatgggttccatcccggggacgacac
caagaaccgcttgaggaagaactctcctag

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